Job Description P76330 Confidence 97.34% Date Thu Jan 5 12:21:53 GMT 2012 Rank 21 Aligned Residues 237 % Identity 10% Template c3c8cB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of mcp_n and cache domains of methyl-2 accepting chemotaxis protein from vibrio cholerae Resolution 1.50 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	I	S	S	Q	R	N	H	L	E	N	V	A	N	A	L	D	K	H	L	Q	Y	N	V	D	K	L	I	F	L	R	N	G	M	R	E	A	L	V	A	P	L	D	F	T	S	L	R	D	A	V	T	E	F	E	Q	H	R	D	E	H	A	W	K	I	E	L	N	R	R	R	T	L	P	V	N	G	V	S
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	R	S	X	V	S	D	S	V	D	E	I	V	D	G	V	S	K	T	T	A	E	V	I	N	G	R	K	S	I	A	Q	Y	A	T	S	L	I	E	N	N	P	E	P	D	N	V	R	T	I	I	S	Q	P	L	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																																																						S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	V	S	E	G	N	L	L	S	R	E	N	E	S	L	D	N	E	I	T	A	A	L	E	V	G	Y	L	L	R	L	A	H	N	S	S	S	M	V	E	Q	A	M	Y	V	S	R	A	G	F	Y	V	S	T	Q	P	T	L	F	T	R	N	V	P	T	R	Y	Y	G	Y	V	T	Q	P	W	F	I	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	F	L	L	V	G	F	G	L	E	K	D	G	S	N	I	N	N	D	P	S	W	N	P	G	P	T	.	.	.	.	W	D	P	R	V	R	P	W	Y	K	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S							T	T	T	S					S		T	T					T	T	.	.	.	.			G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template SS confidence
																																							119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		H	S	Q	R	E	N	R	H	R	A	V	R	W	F	T	S	Q	P	E	H	A	S	N	T	E	P	Q	V	T	V	S	V	P	V	D	S	.	.	N	N	Y	W	Y	G	V	L	G	M	S	I	P	V	R	T	M	Q	Q	F	L	R	N	A	I	D	K	N	L	D	G	E	Y	Q	L	Y	D	S	K	L	R	F
Query Conservation																																						.	.
Alig confidence					.	.	.	.													.																	.	.																													.
Template Conservation					.	.	.	.													.																																															.
Template Sequence		A	K	N	.	.	.	.	A	G	K	L	V	I	T	A	P	Y	A	D	.	S	A	S	G	E	I	L	V	S	V	A	T	P	V	K	D	S	A	T	G	Q	F	L	G	S	I	F	Y	D	V	S	L	A	E	L	A	E	L	V	N	E	V	K	L	F	D	.	A	G	Y	V	F	I	V	S	E	D	G	T	T
Template Known Secondary structure					.	.	.	.		S	S										.	T	T	T														T	T	T																					T	T	S			T	T	.	S								T	T		B
Template Predicted Secondary structure					.	.	.	.													.																																															.
Template SS confidence
		158	.	160					.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S	S	N	P	D	H	P	T	G	N	I	F	D	P	R	E	L	A	L	L	A	Q	A	M	E	H	D	T	R	G	G	I	R	M	D	S	R	Y	V	S	W	E	R	L	D	H	F	D	G	V	L	V	R	V	H	T	L	S	E	G	V	R	G	D	F	G	S	I	S
Query Conservation
Alig confidence																																					.	.	.
Template Conservation																																					.	.	.
Template Sequence		I	A	H	P	K	K	E	F	N	G	K	P	X	S	E	F	L	G	E	S	K	I	N	V	D	T	H	Q	V	I	I	N	G	K	P	.	.	.	Y	A	V	S	F	S	D	V	E	G	E	D	W	Y	V	G	V	V	I	D	E	E	I	A	Y	A	A	L	D	E	L	R	R
Template Known Secondary structure					S	S	G	G	G	T	T	S	B	T					S			S				S							T	T			.	.	.									T	T	S	S
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions