Job Description P76330 Confidence 43.30% Date Thu Jan 5 12:21:53 GMT 2012 Rank 66 Aligned Residues 103 % Identity 17% Template c2pmpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from2 the isoprenoid biosynthetic pathway of arabidopsis thaliana Resolution 2.30 Å

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		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.					.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		H	Q	H	P	F	S	V	I	Q	V	D	L	D	H	F	K	A	I	N	D	R	F	G	H	Q	A	G	D	R	V	L	S	H	A	A	G	L	I	S	S	S	L	R	A	Q	D	V	A	G	R	V	G	G	E	E	F	C	V	I	L	P	G	A	S	L	T	.	.	.	.	E	A	A	E	V	A	E	R	I	R
Query Conservation																																																																				.	.	.	.
Alig confidence																				.	.	.																										.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																				.	.	.																										.	.	.	.	.	.	.	.	.
Template Sequence		P	G	Y	P	L	I	I	G	G	I	V	I	P	H	D	R	G	C	.	.	.	E	A	H	S	D	G	D	V	L	L	H	C	V	V	D	A	I	L	G	A	L	G	L	P	D	.	.	.	.	.	.	.	.	.	I	G	Q	I	F	P	D	S	D	P	K	W	K	G	A	A	S	S	V	F	I	K	E	A	V
Template Known Secondary structure			T						T	T						S				.	.	.		S	S	S																		T				.	.	.	.	.	.	.	.	.					S		S	S		S	S		S	S
Template Predicted Secondary structure																				.	.	.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.										60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	L	N	E	K	E	M	L	I	A	K	S	T	T	I	R	I	S	A	S	L	G	V	S	S	S	E	E	T	G	D	Y	D	F	E	Q	L	Q	S	L	A	D	R	R	L
Query Conservation
Alig confidence								.	.	.	.	.												.											.
Template Conservation								.	.	.	.	.												.											.
Template Sequence		R	L	M	D	E	A	.	.	.	.	.	G	Y	E	I	G	N	L	D	A	T	L	.	I	L	Q	R	P	K	I	S	P	H	.	K	E	T	I	R	S	N	L	S	K	L	L
Template Known Secondary structure								.	.	.	.	.	T											.			S	S	S			G	G	G	.
Template Predicted Secondary structure								.	.	.	.	.												.											.
Template SS confidence
		85	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions