Phyre 2 alignment of P68644 with d2voua1

Job Description P68644
Confidence 99.92% Date Thu Jan 5 12:11:04 GMT 2012

Rank 27 Aligned Residues 240

% Identity 23% Template d2voua1

SCOP info FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain

Resolution 2.6

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	E	D	I	F	D	A	I	I	V	G	A	G	L	A	G	S	V	A	A	L	V	L	A	R	E	G	A	Q	V	L	V	I	E	R	G	N	S	A	G	A	K	N	V	T	G	G	R	L	Y	A	H	S	L	E	H	I	I	P	G	F	A	D	S	A	P	V	E	R	L	I	T	H	E	K	L	A	F	M	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence	S	P	T	T	D	R	I	A	V	V	G	G	S	I	S	G	L	T	A	A	L	M	L	R	D	A	G	V	D	V	D	V	Y	E	R	S	P	Q	P	L	S	G	F	G	T	G	I	V	V	Q	P	E	L	V	H	Y	L	L	E	Q	G	V	E	L	D	S	I	S	V	P	S	S	S	M	E	Y	V	D	A	L
Template Known Secondary structure					S								S													T	T								S	S	S	S	S					S																T	T			G	G	G	T		B										T	T
Template Predicted Secondary structure
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	K	S	A	M	T	M	D	Y	C	N	G	D	E	T	S	P	S	Q	R	S	Y	S	V	L	R	S	K	F	D	A	W	L	M	E	Q	A	E	E	A	G	A	Q	L	I	T	G	I	R	V	D	N	L	V	Q	R	D	G	K	V	V	G	V	E	A	D	G	D	V	I	E	A	K	T	V	I	L	A	D	G
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																		.	.	.
Template Conservation													.	.	.	.	.	.	.	.																		.	.	.
Template Sequence	T	G	E	R	V	G	S	V	P	A	D	W	.	.	.	.	.	.	.	.	R	F	T	S	Y	D	S	I	Y	G	G	L	Y	E	L	F	G	.	.	.	P	E	R	Y	H	T	S	K	C	L	V	G	L	S	Q	D	S	E	T	V	Q	M	R	F	S	D	G	T	K	A	E	A	N	W	V	I	G	A	D	G
Template Known Secondary structure	T												.	.	.	.	.	.	.	.																		.	.	.	S	T	T			T	T										S	S							T	T	S						S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

	162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	N	S	I	L	A	E	K	L	G	M	A	K	R	V	K	P	T	D	V	A	V	G	V	K	E	L	I	E	L	P	K	S	V	I	E	D	R	F	Q	L	Q	G	N	Q	G	A	A	C	L	F	A	G	S	P	T	D	G	L	M	G	G	G	F	L	Y	T	N	E	N	T	L	S	L	G	L	V	C	G	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	G	A	S	V	V	R	K	R	L	L	G	I	E	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure	T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.

	242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	H	L	H	D	A	K	K	S	V	P	Q	M	L	E	D	F	K	Q	H	P	A	V	A	P	L	I	A	G	G	K	L	V	E	Y	S	A	H	V	V	P	E	A	G	I	N	M	L	P	E	L	V	G	D	G	V	L	I	A	G	D	A	A	G	M	C	M	N	L	G	F	T	I	R	G	M	D	L	A	I
Query Conservation
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	M	V	H	G	R	V	L	L	I	G	D	A	A	V	T	P	R	.	.	P	H	A	A	A	G	G	A	K	A	S
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S			T	T					G	G	G	T	S				.	.	G	G	G	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
																																																	294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.

	322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	A	G	E	A	A	A	K	T	V	L	S	A	M	K	S	D	D	F	S	K	Q	K	L	A	E	Y	R	Q	H	L	E	S	G	P	L	R	D	M	R	M	Y	Q	K	L	P	A	F	L	D
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence	D	D	A	R	T	L	A	.	.	.	.	E	V	F	T	K	N	H	D	L	R	G	S	L	Q	S	W	E	T	R	Q	L	Q	Q	G	H	A	Y	L	N	K	V	K	K	M	A	S	R	L	Q
Template Known Secondary structure								.	.	.	.							S																																T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
	324	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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