Job Description P68644 Confidence 98.91% Date Thu Jan 5 12:11:04 GMT 2012 Rank 164 Aligned Residues 152 % Identity 20% Template d1c0pa1 SCOP info Nucleotide-binding domain Nucleotide-binding domain D-aminoacid oxidase, N-terminal domain Resolution 1.20

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	E	D	I	F	D	A	I	I	V	G	A	G	L	A	G	S	V	A	A	L	V	L	A	R	E	G	A	Q	V	L	V	I	E	R	G	N	S	A	G	A	K	N	V	T	G	G	R	L	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	L	E	H	I	I	P	G	F	A	D
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	M	H	S	Q	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	Y	S	V	H	I	L	A	R	D	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K	K	W	V
Template Known Secondary structure						S									S													T	T								S	S		T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	P	V	E	R	L	I	T	H	E	K	L	A	F	M	T	E	K	S	A	M	T	M	D	Y	C	N	G	D	E	T	S	P	S	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	S	V	L	R	S	K	F	D	A	W	L	M	E	Q	A	E	E	A	G	A	Q	L	I	T
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q	Y	L	A	R	E	L	Q	K	L	G	A	T	F	E	R
Template Known Secondary structure				T	T	T	T	S	S											S	S	G	G	G	G	G	G	G	T	T	T	T	T	S	T	T						G	G	G	S	S	T	T																											T	T
Template Predicted Secondary structure
Template SS confidence
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	V	D	N	L	V	Q	R	D	G	K	V	V	G	V	E	A	D	G	D	V	I	E	A	K	T	V	I	L	A	D	G	V	N	S	I
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	T	S	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.			S	B	G	G	G	T		S	S		S							G	G	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1160														.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions