Job Description P68644 Confidence 99.74% Date Thu Jan 5 12:11:04 GMT 2012 Rank 36 Aligned Residues 322 % Identity 14% Template c3nyeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-arginine dehydrogenase; PDBTitle: crystal structure of pseudomonas aeruginosa d-arginine dehydrogenase2 in complex with imino-arginine Resolution 1.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50													.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	F	D	A	I	I	V	G	A	G	L	A	G	S	V	A	A	L	V	L	A	R	E	G	A	Q	V	L	V	I	E	R	G	N	S	A	G	A	K	N	V	T	G	G	R	L	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	H	S	L	E	H	I	I	P	G	F	A	D	S	A	P	V	E	R	L
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	A	D	Y	L	V	I	G	A	G	I	A	G	A	S	T	G	Y	W	L	S	A	H	G	R	V	V	V	L	E	R	E	A	Q	P	G	Y	H	S	T	G	R	S	A	A	H	Y	T	V	A	Y	G	T	P	Q	V	R	A	L	T	A	A	S	R	A	F	F	D	N	P	P	A	G	F	C	E	H	P	L
Template Known Secondary structure												S											T	T	T	S							S	S	S	S	T	T	S	S	G	G	G	S	S						S	S		S	S																S			T	T	S		S	S		S
Template Predicted Secondary structure
Template SS confidence
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.																															.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	H	E	K	L	A	F	M	T	E	K	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	M	D	Y	C	N	G	D	E	T	S	P	S	Q	R	S	Y	S	V	L	R	S	K	F	D	A	W	L	M	E	Q	A	E	E	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	P	R	P	E	M	V	V	D	F	S	D	D	P	E	E	L	R	R	Q	Y	E	S	G	K	A	L	V	P	Q	M	R	L	L	D	A	E	Q	A	C	S	I	V	P	V	L	R	R	D	K	V	F	G	A	T	Y	D	P	T	G	A	D	I	D	T	D	A	L	H	Q	G	Y	L	R	G	I	R	R	N
Template Known Secondary structure												S	S																		T	T													S	T	T	B		G	G	G								T	T																				T
Template Predicted Secondary structure
Template SS confidence
		1082	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	Q	L	I	T	G	I	R	V	D	N	L	V	Q	R	D	G	K	V	V	G	V	E	A	D	G	D	V	I	E	A	K	T	V	I	L	A	D	G	V	N	S	I	L	A	E	K	L	G	M	A	K	R	V	K	P	T	D	V	A	V	G	V	K	E	L	I	E	L	P	K	S	V	I	E	D	R	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	Q	V	L	C	N	H	E	A	L	E	I	R	R	V	D	G	A	W	E	V	R	C	D	A	G	S	Y	R	A	A	V	L	V	N	A	A	G	A	W	C	D	A	I	A	G	L	A	G	V	R	P	L	G	L	Q	P	K	R	R	S	A	F	I	F	A	P	P	P	G	I	D	C	H	D	W	P	M	L
Template Known Secondary structure		T					S	S										T	T							S	S													G	G	G									T																				T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		1162	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	G	N	Q	G	A	A	C	L	F	A	G	S	P	T	D	G	L	M	G	G	G	F	L	Y	T	N	E	N	T	L	S	L	G	L	V	C	G	L	H	H	L	H	D	A	K	K	S	V	P	Q	M	L	E	D	F	K	Q	H	P	A	V	A	P	L	I	A	G	G	K	L	V	E	Y	S	A	H	V	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	L	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	Y	L	K	P	D	A	G	M	L	L	G	S	P	A	N	A	D	P	V	E	A	H	D	V	Q	P	E	Q	L	D	I	A	T	G	M	Y	L	I	E	E	A	T	T	L	T	I	R	R	P	E	H	T	W	A	G	L	R
Template Known Secondary structure				T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T														S	S																				B	S							S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1242	.	.	.	.																	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		P	E	A	G	I	N	M	L	P	E	L	V	G	D	G	V	L	I	A	G	D	A	A	.	.	.	G	M	C	M	N	L	G	F	T	I	R	G	M	D	L	A	I	A	A	G	E	A	A	A	K	T	V	L	S	A	M	K	S	D	D	F	S	K	Q	K	L	A	E	Y	R	Q	H	L	E	S	G
Query Conservation																									.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.													.	.	.																												.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Sequence		S	F	.	.	.	.	.	.	.	.	.	V	A	D	G	D	L	V	A	G	Y	A	A	N	A	E	G	F	F	W	V	A	A	Q	G	G	Y	G	I	Q	T	S	A	A	M	G	E	A	S	A	A	L	I	.	.	.	.	.	R	H	Q	P	L	P	A	H	L	R	E	H	G	L	D	E	A	M	L
Template Known Secondary structure				.	.	.	.	.	.	.	.	.		T	T	S								T	T	S	T	T								T	T		T	T	T	T													.	.	.	.	.	T	T										T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template SS confidence
		1306	.										.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.						1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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