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Job DescriptionP68644
Confidence99.49%DateThu Jan 5 12:11:04 GMT 2012
Rank65Aligned Residues396
% Identity14%Templatec2bs3A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:quinol-fumarate reductase flavoprotein subunit a; PDBTitle: glu c180 -> gln variant quinol:fumarate reductase from2 wolinella succinogenes
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........
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Query Sequence  MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWG
Template Known Secondary structure 


S

STTT


SS
GGGSGGGG

S





SGGGTT

TTT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   50.........60.... .....70.........80.........90.........100.........110
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Query Sequence  . . . . . . . . . . . LYAHSLEHIIPGFAD. . . . . . . . SAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKF
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Template Sequence  CDQKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTM
Template Known Secondary structure  S
TT



B

S


SS



GGGTTSB

B

TT
SS


STT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   111........120.........130.........140..... ....150.........160.........170.........180....
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Query Sequence  DAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVE. . . . . . ADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVG
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Template Sequence  LFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRIYKNTTNAVVCEGTGTAIA
Template Known Secondary structure  T

STTTTT


S




GGGSSSBSS
TT
S
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   161........170.........180.........190.........200.........210.........220.........230.........240
 
   185....190.........200.........210.........220.... .....
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Query Sequence  VKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FLYTN
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Template Sequence  LETGIAQLGNMEAVQFHPTPLFPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRKGKGVQS
Template Known Secondary structure  TTSSS

TT
S
BBTTT

B

TT

TTS
B

TTTGGGS
TTTSB

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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   230.........240.........250.........260.........270.........280.........290.........300.... ...
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Query Sequence  ENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAA. . GMC
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Template Sequence  PYGQHLWLDISILGRKHIETNLRDVQEICEYFAGIDPAEKWAPVLPMQHYSMGGIRTDYRGEAKLKGLFSAGEAACWDMH
Template Known Secondary structure  TT

B
GGG

TS
S
TTTS






TTSB
SSBT
GGG

SS
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   321........330.........340.........350.........360.........370.........380.........390.........400
 
   308.310.........320.........330.........340.........350.........360.........370.........380.......
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Query Sequence  MNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVA
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Template Sequence  GFNRLGGNSVSEAVVAGMIVGEYFAEHCANTQVDLE. . . . . . TKTLEKFVKGQEAYMKSLVESKGTEDVFKIKNRMKDVM
Template Known Secondary structure  TTS

TTT





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B
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   401........410.........420.........430...... ...440.........450.........460.........470....
 
   388.390.........400..
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Query Sequence  RDLFTIDGSAPELMR
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Template Sequence  DDNVGIFRDGPHLEK
Template Known Secondary structure  SSSSB
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   475....480.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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