Job Description P68644 Confidence 98.88% Date Thu Jan 5 12:11:04 GMT 2012 Rank 181 Aligned Residues 180 % Identity 23% Template c1gv4A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:programed cell death protein 8; PDBTitle: murine apoptosis-inducing factor (aif) Resolution 2.0 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	F	D	A	I	I	V	G	A	G	L	A	G	S	V	A	A	L	V	L	A	R	E	.	.	G	A	Q	V	L	V	I	E	R	G	N	S	A	G	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	T	G	G	R	L	Y	A	H	S	L	E	H	I	I	P	G
Query Conservation																										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	V	P	F	L	L	I	G	G	G	T	A	A	F	A	A	A	R	S	I	R	A	R	D	P	G	A	R	V	L	I	V	S	E	D	P	E	L	P	Y	M	R	P	P	L	S	K	E	L	W	F	S	D	D	P	N	V	T	K	T	L	Q	F	R	Q	W	N	G	K	E	R	S	I	Y	F	Q	P	P	S
Template Known Secondary structure										S		S														S	T	T								S	S	S	S			B		S	G	G	G	G	T	G	G	G	S				T	T										T	T	S					S	B	S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	D	S	A	P	V	E	R	L	I	T	H	E	K	L	A	F	M	T	E	K	S	A	M	T	M	D	Y	C	N	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Y	V	S	A	Q	D	L	P	N	I	E	N	G	G	V	A	V	L	T	G	K	K	V	V	H	L	D	V	R	G	N	M	V	K	L	N	D	G	S	Q	I	T	F	E	K	C	L	I	A	T	G	G	T	P	R	S	L	S	A	I	D	R	A	G	A	E	V	K	S	R	T	T	L	F	R	K	I	G	D
Template Known Secondary structure		G		B		G	G	G	G	G	G	S	T	T								S								T	T	T	T					T	T	S																								T	S						T	T						S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
																																													95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	S	P	S	Q	R	S	Y	S	V	L	R	S	K	F	D	A	W	L	M	E	Q	A	E	E	A	G	A	Q	L	I	T	G	I	R	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	A	L	E	K	I	S	R	E	V	K	S	I	T	V	I	G	G	G	F	L	G	S	E	L	A	C	A	L	G	R	K	S	Q	A	S	G	I	E	V	I	Q	L	F	P	E	K	G	N	M	G	K	I	L	P	Q	Y	L	S	N	W	T	M	E	K	V	K	R	E	G	V	K	V	M	P	N	A	I	V
Template Known Secondary structure										T	T		S								S																										S	S	S	S	T	T	T	T	T	S														T	T	T						S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		D	N	L	V	Q	R	D	G	K	V	V	G	V	E	A	D	G	D	V	I	E	A	K	T	V	I	L	A	D	G	.	.	V	N	S	I	L	A	E	K	L	G	M	A	K	R	V	K	P	T	D	V	A	V
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		Q	S	V	G	V	S	G	G	R	L	L	I	K	L	K	D	G	R	K	V	E	T	D	H	I	V	T	A	V	G	L	E	P	N	V	E	L	A	K	T	G	G	L	E	I	D	S	D	F	G	G	F	R	V
Template Known Secondary structure								T	T							T	T	S						S													T					T	T			B		T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions