Job Description P76345 Confidence 94.86% Date Thu Jan 5 12:22:07 GMT 2012 Rank 3 Aligned Residues 136 % Identity 15% Template c3cx5N_ PDB info PDB header:oxidoreductase Chain: N: PDB Molecule:cytochrome b; PDBTitle: structure of complex iii with bound cytochrome c in reduced2 state and definition of a minimal core interface for3 electron transfer. Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	L	L	F	V	A	I	T	Y	A	A	M	E	L	R	G	W	F	P	K	G	S	S	T	Y	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	E	T	H	Y	N	A	G	I	F	V	W	V	L	M	F	S	R	L	I	I	K	H	R	Y	S	D	P	S	I	V	P	P	P	P	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	G	L	C	L	V	I	Q	I	V	T	G	I	F	M	A	M	H	Y	S	S	N	I	E	L	A	F	S	S	V	E	H	I	M	R	D	V	H	N	G	Y	I	L	R	Y	L	H	A	N	G	A	S	F	F	F	M	V	M	F	M	H	M	A	K	G	L	Y	Y	G	S	Y	R	S	P	R	V	T	L	W
Template Known Secondary structure																			T	T				S	T	T	T											T	S	T	T																													T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	M	K	A	A	S	L	M	H	I	M	L	Y	I	T	F	L	A	L	P	L	L	G	I	A	L	M	A	Y	S	G	K	S	W	S	F	L	G	F	N	V	S	P	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	N	S	E	I	K	A	L	I	K	N	I	H	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	G	V	.	.	.	.	.	.	.	.	.	.	I	I	F	I	L	T	I	A	T	A	F	L	G	Y	C	C	V	Y	G	Q	M	S	H	W	G	A	T	V	I	T	N	L	F	S	A	I	P	F	V	G	N	D	I	V	S	W	L	W	G	G	F	S	V	S	N	P	T	I	Q	R	F	F	A	L	H	Y
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.																			B													G	G	G	G	S	T	T	T										T	S	S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		115	.	.	.											.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	A	N	I	G	Y	F	L	I	A	A	H	A	G	A	A	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	P	F	I	I	A	A	M	V	I	M	H	L	M	A	L	H	I	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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