Job Description P76345 Confidence 95.19% Date Thu Jan 5 12:22:07 GMT 2012 Rank 2 Aligned Residues 136 % Identity 13% Template c2qjkM_ PDB info PDB header:electron transport Chain: M: PDB Molecule:cytochrome b; PDBTitle: crystal structure analysis of mutant rhodobacter2 sphaeroides bc1 with stigmatellin and antimycin Resolution 3.10 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	L	L	F	V	A	I	T	Y	A	A	M	E	L	R	G	W	F	P	K	G	S	S	T	Y	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	E	T	H	Y	N	A	G	I	F	V	W	V	L	M	F	S	R	L	I	I	K	H	R	Y	S	D	P	S	I	V	P	P	P	P	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	A	F	C	L	V	L	Q	I	V	T	G	I	V	L	A	M	H	Y	T	P	H	V	D	L	A	F	A	S	V	E	H	I	M	R	N	V	N	G	G	F	M	L	R	Y	L	H	A	N	G	A	S	L	F	F	I	A	V	Y	L	H	I	F	R	G	L	Y	Y	G	S	Y	K	A	P	R	E	V	T	W
Template Known Secondary structure																			T	T				S														T	S	T	T																													T	T	T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	Q	M	K	A	A	S	L	M	H	I	M	L	Y	I	T	F	L	A	L	P	L	L	G	I	A	L	M	A	Y	S	G	K	S	W	S	F	L	G	F	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	F	V	T	P	N	S	E	I	K	A	L	I	K	N	I	H	E
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	G	M	.	.	.	.	.	.	.	.	.	.	L	I	Y	L	A	M	M	A	T	A	F	M	G	Y	V	L	P	W	G	Q	M	S	F	W	G	A	T	V	I	T	G	L	F	G	A	I	P	G	I	G	H	S	I	Q	T	W	L	L	G	G	P	A	V	D	N	A	T	L	N	R	F	F	S	L	H	Y
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.																T	T		B																T	S	S	T	T										T	S	S	S	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	A	N	I	G	Y	F	L	I	A	A	H	A	G	A	A	L	F	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	P	F	V	I	A	A	L	V	A	I	H	I	W	A	F	H	S	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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