Job Description P42619 Confidence 0.96% Date Thu Jan 5 12:01:51 GMT 2012 Rank 17 Aligned Residues 57 % Identity 11% Template c2wwaA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:sec sixty-one protein homolog; PDBTitle: cryo-em structure of idle yeast ssh1 complex bound to the2 yeast 80s ribosome Resolution 8.90 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	T	T	A	L	F	T	A	G	F	T	L	L	T	A	F	L	F	H	S	N	F	A	E	G	V	N	S	L	M	F	M	K	N	L	T	I	S	G	G	F	L	L	L	A	I	T	G	P	G	A	Y	S	I	D	R	L	L	N	K	K	W
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		L	T	K	V	F	A	I	V	Q	Y	V	I	L	T	N	I	F	I	F	A	G	Y	F	G	D	D	L	S	V	V	Q	I	G	L	I	N	F	Q	L	V	G	A	G	I	F	T	T	L	.	.	.	.	.	.	.	L	A	E	V	I	D	K	G	F
Template Known Secondary structure																		T	T	T	T	T	T	T	S				S	T	T											T	T	T						.	.	.	.	.	.	.							T	T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions