Return to main results Retrieve Phyre Job Id

Job DescriptionP52133
Confidence93.94%DateThu Jan 5 12:05:38 GMT 2012
Rank40Aligned Residues58
% Identity19%Templated2dt5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional repressor Rex, N-terminal domain
Resolution2.16

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20..... ....30.........40.........50.........60....
Predicted Secondary structure 




.
















Query SS confidence 





















.






































Query Sequence  AERRHDRLAVRLSLIISRLVAG. ETLSVRKLAAEFGVSVRTLRRDFRERLMYLDLEYQSGYC
Query Conservation       
 

 

  
   
   .  

  


  
 

 


 


  
     
      
Alig confidence 





















.




























...






Template Conservation 
 


 


 
 
 
  
   
   


 


   

   






 

  ...
 




Template Sequence  PEAAISRLITYLRILEELEAQGVHRTSSEQLGGLAQVTAFQVRKDLSYFGSY. . . GTRGVGY
Template Known Secondary structure 
TT


TS
TT

...

TTT
Template Predicted Secondary structure 









...






Template SS confidence 





























































   4.....10.........20.........30.........40.........50..... ....60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions