Job Description P52133 Confidence 88.74% Date Thu Jan 5 12:05:38 GMT 2012 Rank 115 Aligned Residues 101 % Identity 9% Template d1ylfa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator Rrf2 Resolution 2.50

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	R	R	H	D	R	L	A	V	R	L	S	L	I	I	S	R	L	V	A	G	E	T	L	S	V	R	K	L	A	A	E	F	G	V	S	V	R	T	L	R	R	D	F	R	E	R	L	M	Y	L	D	L	E	Y	Q	S	G	Y	C	R	L	R	T	A	G	S	E	M	Q	M	V	P	D	V	L	I	F
Query Conservation
Alig confidence										.										.																																							.								.	.	.
Template Conservation										.										.																																							.								.	.	.
Template Sequence		K	I	S	S	R	F	S	I	.	A	V	H	I	L	S	I	L	K	.	N	N	P	S	S	L	C	T	S	D	Y	X	A	E	S	V	N	T	N	P	V	V	I	R	K	I	X	S	Y	L	K	Q	A	G	F	V	Y	V	.	N	G	G	A	G	L	L	.	.	.	K	D	L	H	E	I	T	L	L	D	V	Y
Template Known Secondary structure										.										.		S		G	G	G											T	S															T	T	S				.							S	.	.	.	S		G	G	G		B
Template Predicted Secondary structure										.										.																																							.								.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	R	S	G	L	A	G	L	F	P	G	L	D	R	R	L	V	N	A	L	L	M	C	D	E	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	V	N	V	I	G	A	N	I	Q	A	V	L	E	I	I	L	I	Q	A	Q	S	A	X	E	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions