 |
Job Description | P52133 | Confidence | 87.40% | Date | Thu Jan 5 12:05:38 GMT 2012 |
Rank | 129 | Aligned Residues | 39 |
% Identity | 28% | Template | d1d5ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| AraC type transcriptional activator
|
Resolution | 2.70 |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | R | L | S | L | I | I | S | R | L | V | A | G | . |
. |
E | T | L | S | V | R | K | L | A | A | E | F | G | V | S | V | R | T | L | R | R | D | F | R | E |
Query Conservation |   |
|   |
|
|   |   |
|   |   |   |
|   |   |   | . | . |   |   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |
Template Sequence |   |
A | G | I | I | R | D | L | L | I | W | L | E | G | H | L | D | Q | P | L | S | L | D | N | V | A | A | K | A | G | Y | S | K | W | H | L | Q | R | M | F | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S |
|
|
|  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|