Job Description P52133 Confidence 47.47% Date Thu Jan 5 12:05:38 GMT 2012 Rank 480 Aligned Residues 56 % Identity 20% Template c1iufA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:centromere abp1 protein; PDBTitle: low resolution solution structure of the two dna-binding2 domains in schizosaccharomyces pombe abp1 protein Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.							.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.
Query Sequence		M	T	Q	A	E	R	R	H	D	R	L	A	V	R	L	S	L	I	I	S	R	L	V	A	G	E	T	L	S	V	R	K	L	A	A	E	F	.	.	.	.	.	.	G	V	S	V	R	T	L	R	R	D	F	R	E	R	L	M	Y	L	D
Query Conservation																																							.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	K	I	K	R	R	A	I	T	E	H	E	K	R	A	L	R	H	Y	F	F	Q	L	Q	N	R	S	G	Q	Q	D	L	I	E	W	F	R	E	K	F	G	K	D	I	S	Q	P	S	V	S	Q	I	L	S	S	K	Y	S	Y	L	D
Template Known Secondary structure						S	S	S				S												S	S	S	S																S	S			S	S	S	S	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions