Job Description P16682 Confidence 99.45% Date Thu Jan 5 11:35:27 GMT 2012 Rank 39 Aligned Residues 267 % Identity 10% Template d2nxoa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.04

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	.	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q
Query Conservation																																													.
Alig confidence														.	.	.	.	.	.	.												.													.
Template Conservation														.	.	.	.	.	.	.												.
Template Sequence		T	R	P	R	V	G	H	I	Q	F	L	N	.	.	.	.	.	.	.	C	L	P	L	Y	W	G	L	A	R	T	.	G	T	L	L	D	F	E	L	T	K	D	T	P	E	K	L	S	E	Q	L	V	R	G	D	L	D	I	G	P	V	T	L	V	E	F	L	K	N	A	D	D	L	V	A	F	P	D	I	A
Template Known Secondary structure											S	G	G	.	.	.	.	.	.	.	G										T	.	S	G	G	G	G																	T	T	S		S												T	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.								.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	T	N	A	L	A
Query Conservation
Alig confidence											.	.	.	.							.	.	.															.	.	.	.	.																								.	.	.
Template Conservation											.	.	.	.							.	.	.															.	.	.	.	.																								.	.	.
Template Sequence		V	G	C	D	G	P	V	M	S	.	.	.	.	C	V	I	V	S	Q	.	.	.	V	P	L	D	R	L	D	G	A	R	V	A	L	G	.	.	.	.	.	S	T	S	R	T	S	V	R	L	A	Q	L	L	L	S	E	R	F	G	V	Q	P	D	.	.	.	Y	Y	T	C	P	P	D	L	S	L	M	A	A
Template Known Secondary structure					S	S			S	S	.	.	.	.						S	.	.	.	S		T	T	S		S	S	S						.	.	.	.	.	T	T		S													T	S						.	.	.								S	S
Template Predicted Secondary structure											.	.	.	.							.	.	.															.	.	.	.	.																								.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.					.	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T	P	E	E	K	A	V	L	E	R	L	G	W
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		V	L	I	G	D	A	A	L	R	A	N	M	I	D	G	P	R	Y	G	L	D	V	H	D	L	G	A	L	W	K	E	.	.	W	T	G	L	P	F	V	F	A	V	W	A	A	R	R	D	Y	A	E	R	E	P	V	I	T	R	K	V	H	E	A	F	L	A	S	R	N	L	S	L	E	E	V	E	K	V	A
Template Known Secondary structure														T					T	T													.	.			S																																							T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	F	R	A	S	S	D	L	Q	L	V	P	I	R	Q	L	A	L	F	K	E	M	Q	G	V	K	S	N	K	G	L	N	E	Q	D	K	L	A	K	T	T	E	I	Q	A	Q	L	D	D	L	D	R	L	N	N	A	L	S	A	M	S	S	V	S
Query Conservation
Alig confidence																							.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		E	Q	A	A	R	W	E	A	F	D	E	D	T	L	A	K	Y	F	T	T	L	.	.	.	.	.	.	.	D	F	R	F	G	A	P	Q	L	E	A	.	.	.	.	.	V	T	E	F	A	R	R	V	G	P	T	T	G	F	P	A	D	V	K	V	E
Template Known Secondary structure						T	T	S	S	S												S	.	.	.	.	.	.	.	B				S							.	.	.	.	.									S	T	T	T	T	S		T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.								.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions