Job Description P16682 Confidence 97.94% Date Thu Jan 5 11:35:27 GMT 2012 Rank 105 Aligned Residues 189 % Identity 15% Template d2i6ea1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.50

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.																	.	.	.
Template Conservation													.	.	.	.	.	.	.																	.	.	.
Template Sequence		P	Y	R	A	G	W	I	H	F	T	N	.	.	.	.	.	.	.	V	A	P	I	L	D	S	L	E	L	P	P	G	V	T	A	.	.	.	I	T	G	V	P	T	Q	X	N	A	A	L	L	S	G	E	V	D	I	A	N	V	S	A	V	E	F	I	R	H	A	D	T	L	A	A	L	P	D	F	S	V	A
Template Known Secondary structure											G	G	.	.	.	.	.	.	.	G					T	T					T	T				.	.	.															S	S		S												T	T	T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.								.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	T	N	A	L	A	V	A
Query Conservation
Alig confidence									.	.	.	.													.	.	.	.	.							.	.	.	.	.																																.	.	.	.	.	.	.
Template Conservation									.	.	.	.													.	.	.	.	.							.	.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		V	L	G	P	V	Y	S	.	.	.	.	V	N	L	F	H	T	C	P	L	P	E	L	.	.	.	.	.	R	R	V	A	L	T	.	.	.	.	.	S	Q	S	A	X	S	V	A	L	L	E	V	L	L	R	Q	K	G	L	S	P	V	L	E	R	A	E	G	T	A	E	.	.	.	.	.	.	.	S	L	L
Template Known Secondary structure			S	S			S	S	.	.	.	.						S	S		G	G	G		.	.	.	.	.							.	.	.	.	.	T	T															T	T										S				.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.													.	.	.	.	.							.	.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.													.	.	.	.	220	.	.	.	.										.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	L	K	V	I	W	K	.	.	.	.	.	.	.	.	.	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	.	.	T	T	K	D	K	I	Y
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		A	A	G	Y	D	G	V	L	R	I	G	D	D	A	L	R	E	W	Y	G	V	V	G	P	L	T	P	E	R	T	X	T	S	L	P	H	T	G	R	G	I	T	V	T	D	L	A	Q	E	W	F	D	L	T	G	H	P	F	T	F	A	V	W	A	Y	R	K	D	N	P	P	P	A	A	L	L	Q	A	X	R
Template Known Secondary structure		T	T	T		S						S											S					S	S	S		G	G	G			S			T	T															S	S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		249	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		225	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions