Job Description P16682 Confidence 57.93% Date Thu Jan 5 11:35:27 GMT 2012 Rank 189 Aligned Residues 211 % Identity 11% Template d2fyia1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.80

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	E	Q	E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q
Query Conservation
Alig confidence																												.	.	.																	.																									.	.	.	.
Template Conservation																												.	.	.																	.																									.	.	.	.
Template Sequence		T	N	D	T	S	G	V	L	T	I	A	T	T	H	T	Q	A	R	Y	S	L	P	E	V	I	K	.	.	.	A	F	R	E	L	F	P	E	V	R	L	E	L	I	Q	G	.	T	P	Q	E	I	A	T	L	L	Q	N	G	E	A	D	I	G	I	A	S	E	R	L	S	.	.	.	.	N	D	P	Q	L	V
Template Known Secondary structure			T	T																	T							.	.	.							T	T									.												T	S		S					S	S	S	S	T	.	.	.	.	T		T	T
Template Predicted Secondary structure																												.	.	.																	.																									.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	.	.	.	.	.	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N
Query Conservation																												.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.												.	.	.	.	.										.	.	.	.																			.	.											.	.
Template Conservation										.	.	.	.	.	.	.																										.	.	.	.																			.	.											.	.
Template Sequence		A	F	P	W	F	R	W	H	.	.	.	.	.	.	.	H	S	L	L	V	P	H	D	H	P	L	T	Q	I	S	P	L	T	L	E	S	I	A	K	W	.	.	.	.	P	L	I	T	Y	R	Q	G	I	T	G	R	S	R	I	D	D	A	.	.	F	A	R	K	G	L	L	A	D	I	.	.	V	L	S	A
Template Known Secondary structure										.	.	.	.	.	.	.							T	T		G	G	G	T	S	S	S							T	T	S	.	.	.	.							T	T	S	T	T								.	.				T	T						.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.																										.	.	.	.																			.	.											.	.
Template SS confidence
		160	.	.	.	.	.	.	.								.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220			.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.								.
Query SS confidence																																																							.	.								.
Query Sequence		A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	.	.	V	W	R	K	N	L	S	.	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T
Query Conservation																																																							.	.								.
Alig confidence																	.																	.	.	.	.	.	.																.	.								.
Template Conservation																	.																	.	.	.	.	.	.
Template Sequence		Q	D	S	D	V	I	K	T	Y	V	A	L	G	L	G	.	I	G	L	V	A	E	Q	S	S	G	E	Q	E	E	E	N	.	.	.	.	.	.	L	I	R	L	D	T	R	H	L	F	D	A	N	T	V	W	L	G	L	K	R	G	Q	L	Q	R	N	Y	V	W	R	F	L	E	L	C	N	A	G	L	S	V
Template Known Secondary structure		S	S											T	S		.						G	G	G	G	S	T	T			T	T	.	.	.	.	.	.							T	T	T	S											T	T																S	S	S
Template Predicted Secondary structure																	.																	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		258	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	K	A	V	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	I	K	R	Q	V	M	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions