Return to main results Retrieve Phyre Job Id

Job DescriptionP16682
Confidence96.67%DateThu Jan 5 11:35:27 GMT 2012
Rank123Aligned Residues197
% Identity13%Templated2f34a1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.74

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70. ........80.........90.........100.........110.........120.
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Query Sequence  FLQDMEKKLGVKVNAFFAP. . . . . . . . . . . DYAGIIQGMRFNKVDIAWYGNLSAMEAVDRANGQVFAQTVAADGSPGYWS
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Template Sequence  LLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTITYVREKVIDFSKPFMTLGI. . . . . . . S
Template Known Secondary structure  T


TT




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TTS
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   3940.........50.........60.........70.........80.........90.........100.........110 .
 
   122.......130.........140.........150.........160. ........170.........180.........190.........
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Query Sequence  VLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVPG. . YYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVAT
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Template Sequence  ILYRKPIDSADDLAKQTKI. . . . EYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQSALVKNSDEGIQRVLTTDYALLM
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BTTS


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   112.......120.........130 .........140.........150.........160.........170.........180.......
 
   200.........210.........220.........230.........240.........250.........260.......
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Query Sequence  NNTENLDKLKTSAPEKLKELKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERL
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Template Sequence  ESTSIEYVTQRNCN. . . . . LTQIGGLIDSKGYGVGTPIGSP. . YRDKITIAILQLQEEGKLHMMKEKW
Template Known Secondary structure 
TT.....SS
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TT
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   190.........200... ......210.........220..... ....230.........240.........250
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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