Job Description P16682 Confidence 99.46% Date Thu Jan 5 11:35:27 GMT 2012 Rank 38 Aligned Residues 191 % Identity 16% Template d2czla1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V
Query Conservation
Alig confidence										.							.	.	.											.								.
Template Conservation										.							.	.	.											.								.
Template Sequence		A	L	R	L	G	F	S	P	.	P	N	D	T	F	I	.	.	.	F	Y	A	L	V	H	G	R	V	E	.	S	P	V	P	L	E	P	.	V	L	E	D	V	E	T	L	N	R	W	A	L	E	G	R	L	P	L	T	K	L	S	Y	A	A	Y	A	Q	V	R	D	R	Y	V	A	L	R	S	G	G	A	L
Template Known Secondary structure										.							.	.	.						T	T	S	S		.		S	S					.														T	T			S										T	T		T	T	T					S	S	S
Template Predicted Secondary structure										.							.	.	.											.								.
Template SS confidence
		3	.	.	.	.	.	.	10		.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	T	N	A	L	A	V	A
Query Conservation
Alig confidence						.	.	.	.	.								.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.								.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	G	V	.	.	.	.	.	G	P	L	V	V	A	R	.	.	.	.	G	P	L	Q	A	L	E	G	L	.	.	.	.	R	V	A	V	P	G	R	H	T	T	A	Y	F	L	L	S	L	Y	A	.	.	.	.	.	.	.	.	.	.	Q	G	F	V	P	V	E	V	R	Y	D	R	I	L	P	M	V	A
Template Known Secondary structure			S	S		.	.	.	.	.							S	.	.	.	.	S			S			T	T		.	.	.	.					S		T	T	S											.	.	.	.	.	.	.	.	.	.	S	S								G	G	G
Template Predicted Secondary structure						.	.	.	.	.								.	.	.	.										.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.						.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.											.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																																			.	.	.
Query SS confidence																																			.	.	.
Query Sequence		N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	.	.	.	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F
Query Conservation																																			.	.	.
Alig confidence																																			.	.	.
Template Conservation
Template Sequence		Q	G	E	V	E	A	G	L	I	I	H	E	S	R	F	T	Y	P	R	Y	G	L	V	Q	V	V	D	L	G	A	W	W	E	E	R	T	G	L	P	L	P	L	G	A	I	L	A	R	R	D	L	G	E	G	L	I	R	A	L	D	E	A	V
Template Known Secondary structure		T	T	S	S	S						T	T					G	G	G	G	T																S	S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions