Job Description P16682 Confidence 72.28% Date Thu Jan 5 11:35:27 GMT 2012 Rank 166 Aligned Residues 161 % Identity 19% Template d1z7me1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.90

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	.	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K
Query Conservation																																											.
Alig confidence										.																				.	.	.	.										.												.	.	.	.																						.	.
Template Conservation										.																				.	.	.	.																						.	.	.	.																						.	.
Template Sequence		D	L	Q	I	I	F	G	K	.	P	N	D	V	I	T	F	L	E	H	G	I	V	D	I	G	F	V	G	.	.	.	.	K	D	T	L	D	E	N	D	F	D	D	Y	Y	E	L	L	Y	L	K	I	G	.	.	.	.	Q	C	I	F	A	L	A	S	Y	P	D	F	S	N	K	N	F	Q	R	H	K	.	.
Template Known Secondary structure		S								.										T	T	S		S						.	.	.	.							S	S											T	T		.	.	.	.										G	G	G	G	G				S	S			.	.
Template Predicted Secondary structure										.																				.	.	.	.																						.	.	.	.																						.	.
Template SS confidence
		43	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I
Query Conservation
Alig confidence		.	.															.	.	.	.	.	.	.						.	.	.														.	.																									.	.	.	.	.	.
Template Conservation		.	.															.	.	.	.	.	.	.						.	.	.														.	.																									.	.	.	.	.	.
Template Sequence		.	.	R	I	A	S	K	Y	P	R	V	T	K	K	Y	F	.	.	.	.	.	.	.	A	Q	K	Q	E	.	.	.	D	I	E	I	I	K	L	E	G	S	V	E	L	.	.	G	P	V	V	G	L	A	D	A	I	V	D	I	V	E	T	G	N	T	L	S	A	N	G	.	.	.	.	.	.	L	E	V	I
Template Known Secondary structure		.	.					S										.	.	.	.	.	.	.			T	T		.	.	.								S	S		T	T		.	.				T	T	S		S							S	S	S					T	T	T	.	.	.	.	.	.
Template Predicted Secondary structure		.	.															.	.	.	.	.	.	.						.	.	.														.	.																									.	.	.	.	.	.
Template SS confidence
				112	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130				.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	E	K	I	S	D	I	S	T	R	M	I	V	N	K	S	S	F	K	F	K	K	D	K	I	I	E	M	V	E	R	L	E	D
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions