Job Description P16682 Confidence 97.39% Date Thu Jan 5 11:35:27 GMT 2012 Rank 113 Aligned Residues 212 % Identity 15% Template d1y9ua_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.39

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	.	.	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	L	L	D	A	F	A	K	D	S	G	I	K	V	N	T	V	F	V	K	D	G	L	L	E	R	V	R	A	E	G	D	K	S	P	A	D	V	L	M	T	V	D	I	G	N	L	I	D	L	V	N	G	G	V	T	Q	K	I	Q	S	Q	T	L	D	S	V	V	P	A	N	L	R	G	A	E	G	S	W
Template Known Secondary structure																						S	S										G	G	G										S										T	T														S		G	G	G	B		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
				116	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.
Predicted Secondary structure		.	.														.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence		.	.														.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		.	.	S	P	G	Y	W	S	V	L	I	V	N	K	D	.	.	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	.	.	.	.	.	.	.	.	R	T	V	N	A	G	H
Query Conservation		.	.														.	.																																																	.	.	.	.	.	.	.	.
Alig confidence		.	.														.	.																																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	L	S	L	R	D	R	V	L	Y	V	E	K	D	L	K	L	D	S	F	R	Y	G	D	L	A	D	P	K	W	K	G	K	V	C	I	R	S	G	Q	H	P	Y	N	T	A	L	V	A	A	M	I	A	H	D	G	A	E	A	T	E	K	W	L	R	G	V	K	A	N	L	A	R	K	A	A	G	G	D
Template Known Secondary structure															T	T							B	G	G	G	G	G		G	G	G	T	T							T	T	S																														B	S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.											.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	.	.	.	.	.	.	.	.	.	.	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																																	.
Template Sequence		R	D	V	A	R	D	I	L	G	G	I	C	D	I	G	L	A	N	A	Y	Y	V	G	H	M	K	N	A	E	P	G	T	D	A	R	K	W	G	D	A	I	K	V	V	R	P	T	F	A	G	G	T	H	V	N	I	S	G	A	A	V	A	A	H	A	P	N	K	A	N	A	V	K	L	L	E	Y	L	V	.
Template Known Secondary structure										T	T	S		S															S		T	T	S								T							B					B											T	T		T	T												T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	K	T	P	E	E	K	A	V	L	E	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	S	E	P	A	Q	T	L	Y	A	Q
Template Known Secondary structure		.	.	.	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					263	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions