Job Description P16682 Confidence 96.27% Date Thu Jan 5 11:35:27 GMT 2012 Rank 127 Aligned Residues 204 % Identity 18% Template d1y4ta_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																									.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	.	.	.	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	E	I	I	K	K	F	E	E	K	T	G	I	K	V	N	H	T	Q	A	K	A	S	E	L	I	K	R	L	S	L	E	G	S	N	S	P	A	D	I	F	I	T	A	D	I	S	N	L	T	E	A	K	N	L	G	L	L	S	P	V	S	S	K	Y	L	E	E	F	I	P	A	H	L	R	D	K	D	K
Template Known Secondary structure																																			G	G	G									S	S										T	T														S		G	G	G	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
						116	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.
Predicted Secondary structure		.	.	.	.														.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.														.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	S	P	G	Y	W	S	V	L	I	V	N	K	D	.	.	.	.	.	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	.	.	.	.	.	.	.	.	R	T
Query Conservation		.	.	.	.														.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	W	F	A	I	T	K	R	A	R	I	I	A	Y	N	K	N	T	N	I	D	I	S	K	M	K	N	Y	E	D	L	A	K	A	E	F	K	G	E	I	V	M	R	S	A	T	A	P	Y	S	K	T	L	L	A	S	I	I	A	N	D	G	N	K	E	A	K	A	W	A	K	G	V	L	E	N	L	A	T	N
Template Known Secondary structure		S															T	T	S					T	T			S	G	G	G	G	G		G	G	G	T	T							T	T	S																														B	S	S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230										.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.											.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.											.
Query Sequence		V	N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	.	.	.	.	.	.	.	.	.	D	P	I	V	W	R	K	N	L	S	.	E	T	T	K	D	K	I	Y
Query Conservation																																																						.	.	.	.	.	.	.	.	.											.
Alig confidence																																																						.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		P	K	G	G	D	R	D	Q	A	R	Q	V	F	A	G	E	A	K	F	A	V	M	N	T	Y	Y	I	G	L	L	K	N	S	K	N	P	K	D	V	E	V	G	N	S	L	G	I	I	F	P	N	Q	D	N	R	G	T	H	I	N	I	S	G	I	A	M	T	K	S	S	K	N	Q	D	A	A	K	K	F	M
Template Known Secondary structure				S	S											T	S		S														T		S	S									T						T	T	T	T	T	T		B											T	T		S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		249	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	F	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	F	M	L	S
Template Known Secondary structure					T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions