Job Description P16682 Confidence 99.77% Date Thu Jan 5 11:35:27 GMT 2012 Rank 17 Aligned Residues 225 % Identity 10% Template d1xs5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.85

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		K	D	E	T	V	G	V	G	V	L	S	E	P	H	A	R	L	L	E	.	.	.	.	.	I	A	K	E	E	V	K	K	Q	H	I	E	L	R	I	V	E	F	T	N	Y	V	A	L	N	E	A	V	M	R	G	D	I	L	M	N	F	F	Q	H	V	P	H	M	Q	Q	F	N	Q	E	H	N	G	D	L	V
Template Known Secondary structure												S	T	T							.	.	.	.	.								T	T	T									S												T	S	S	S																		T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.						.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.																							.	.	.	.																	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																							.	.	.	.																	.	.	.
Template Sequence		S	V	G	N	V	.	.	.	.	.	H	V	E	P	L	A	L	Y	S	R	T	Y	R	H	V	S	D	F	P	A	G	A	.	.	.	.	V	I	A	I	P	N	D	S	S	N	E	A	R	A	L	R	.	.	.	L	L	E	A	A	G	F	I	R	M	R	A	G	S	G	L	F	A	T	V	E	D	V	Q	Q
Template Known Secondary structure							.	.	.	.	.										S	S			S	G	G	G			T	T		.	.	.	.							S										.	.	.					T	T	S					T	T			T	T			G	G	G
Template Predicted Secondary structure							.	.	.	.	.																							.	.	.	.																	.	.	.
Template SS confidence
		80	.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
					177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	R	T	V	N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N
Query Conservation		.	.	.
Alig confidence		.	.	.																																								.	.	.	.																					.
Template Conservation																																												.	.	.	.																					.
Template Sequence		N	V	R	N	V	V	L	Q	E	V	E	S	A	L	L	P	R	V	F	D	Q	V	D	G	A	V	I	N	G	N	Y	A	I	M	A	G	L	S	A	R	R	D	.	.	.	.	G	L	A	V	E	P	D	A	S	A	Y	A	N	V	L	V	V	K	R	G	.	N	E	A	D	A	R	V	Q	A	V	L	R	A
Template Known Secondary structure			T	T									G	G	G					G	G	G	S	S												T	T			T	T	T	T	.	.	.	.		S				S		G	G	G	G								T	T	.		T	T
Template Predicted Secondary structure																																												.	.	.	.																					.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	K	T	P	E	E	K	A	V	L	E	R	L	G	W	A	P	F	R	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	G	G	R	V	R	T	Y	L	K	E	R	Y	K	G	G	E	V	A	P	A
Template Known Secondary structure			T	S												T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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