Job Description P16682 Confidence 94.18% Date Thu Jan 5 11:35:27 GMT 2012 Rank 138 Aligned Residues 225 % Identity 11% Template d1xc1a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.51

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																	.																						.	.
Query SS confidence																																						.	.	.	.																	.																						.	.
Query Sequence		K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	.	.	.	.	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	.	V	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	.	.
Query Conservation																																						.	.	.	.																	.																						.	.
Alig confidence																										.												.	.	.	.																	.																						.	.
Template Conservation																										.
Template Sequence		K	E	A	A	Q	A	V	A	D	A	F	T	R	A	T	G	I	K	V	K	L	N	S	A	.	K	G	D	Q	L	A	G	Q	I	K	E	E	G	S	R	S	P	A	D	V	F	Y	S	E	Q	I	P	A	L	A	T	L	S	A	A	N	L	L	E	P	L	P	A	S	T	I	N	E	T	R	G	K	G	V	P
Template Known Secondary structure																										.											T	T		T	T	S	S		S					S											T	T		B											T			T	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
															120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																																																	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																																																	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	V	L	I	V	N	K	D	.	.	.	.	.	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.																																																	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	K	K	D	W	V	A	L	S	G	R	S	R	V	V	V	Y	D	T	R	K	L	S	E	K	D	L	E	K	S	V	L	N	Y	A	T	P	K	W	K	N	R	I	G	Y	V	P	T	S	G	A	F	L	E	Q	I	V	A	I	V	K	L	K	G	E	A	A	A	L	K	W	L	K	G	L	K	E	Y
Template Known Secondary structure				T	T	S																T	T	T			G	G	G	S		S	S	G	G	G	G	S	S	G	G	G	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.						.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																.	.	.	.	.																			.
Query SS confidence																																																.	.	.	.	.																			.
Query Sequence		R	T	V	N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	.	.	.	.	.	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	.	E	T	T	K	D	K	I	Y	D	F
Query Conservation																																																.	.	.	.	.																			.
Alig confidence																																																.	.	.	.	.																			.
Template Conservation
Template Sequence		G	K	P	Y	A	K	N	S	V	A	L	Q	A	V	E	N	G	E	I	D	A	A	L	I	N	N	Y	Y	W	H	A	F	A	R	E	K	G	V	Q	N	V	H	T	R	L	N	F	V	R	H	R	D	P	G	A	L	V	T	Y	S	G	A	A	V	L	K	S	S	Q	N	K	D	E	A	K	K	F	V	A	F
Template Known Secondary structure		S				S	S										T	T	S	S	S																		G	G	G										T	T		G	G	G										B	T	T		S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	N	Y	G	K	T	P	E	E	K	A	V	L	E	R	L	G	W	A	P	F	R	A	S	S	D	L
Query Conservation
Alig confidence				.	.	.	.													.	.
Template Conservation				.	.	.	.													.	.
Template Sequence		L	A	.	.	.	.	G	K	E	G	Q	R	A	L	T	A	V	R	.	.	A	E	Y	P	L	N	P	H
Template Known Secondary structure				.	.	.	.	S								T	T	T	S	.	.					S	S	T	T
Template Predicted Secondary structure				.	.	.	.													.	.
Template SS confidence
		249	250					.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions