Job Description P16682 Confidence 94.95% Date Thu Jan 5 11:35:27 GMT 2012 Rank 135 Aligned Residues 213 % Identity 15% Template d1q35a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.20

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.																												.	.	.	.	.	.	.	.	.
Query SS confidence																																.																												.	.	.	.	.	.	.	.	.
Query Sequence		W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	.	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	.	.	.	.	.	.	.	.	.	F	A	Q	T	V	A	A	D	G	S	P	G	Y
Query Conservation																																.																												.	.	.	.	.	.	.	.	.
Alig confidence																																.																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	P	M	L	K	N	F	E	K	D	T	G	I	K	V	N	I	I	F	A	D	G	L	V	D	R	V	K	Q	E	G	E	L	S	P	A	D	V	L	L	T	V	D	I	S	R	V	M	E	I	V	N	A	D	L	A	Q	K	I	D	S	K	V	L	E	K	N	I	P	A	Q	F	R	D	S	N	D	Q	W
Template Known Secondary structure		T																															G	G	G									S											T	T		B												S		G	G	G	B		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		120							.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180
Predicted Secondary structure			.	.	.	.	.	.									.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.									.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		W	.	.	.	.	.	.	S	V	L	I	V	N	K	D	.	.	.	.	.	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	.	.	.	.	.	.	.	.	R	T	V	N
Query Conservation			.	.	.	.	.	.									.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.									.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	L	T	T	R	A	R	V	I	Y	T	S	K	D	R	V	G	K	L	P	A	G	F	D	Y	L	D	L	A	K	P	E	Y	K	G	K	V	C	V	R	S	G	K	N	S	Y	N	V	S	L	F	A	A	M	I	E	H	Y	G	I	E	K	T	K	A	F	L	E	G	L	K	A	N	L	A	R	K	P	Q
Template Known Secondary structure															T	T	T	T		S			T	T			G	G	G	G	G	S	G	G	G	T	T					S		T	T	S																													T	B	S	S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	.	.	.	.	.	.	.	S	E	T	T	K	D	K	I	Y	D	F	F	M	N
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.														.
Template Conservation																																																																																	.
Template Sequence		G	G	D	R	D	Q	V	K	A	I	K	E	G	I	C	D	Y	S	I	G	N	S	Y	Y	Y	G	K	M	L	D	D	E	K	Q	K	S	W	A	E	A	A	I	I	N	F	P	S	G	E	H	G	T	H	K	N	I	S	G	V	V	I	A	K	H	S	P	N	K	A	N	A	V	K	L	I	E	Y	L	S	.
Template Known Secondary structure		S												T	S		S						T									S	T	T	T						T								S	T	T		B										B	T	T		T	T													.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	K	T	P	E	E	K	A	V	L	E	R
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	E	K	A	Q	G	L	Y	A	E
Template Known Secondary structure		.	.	.	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					255	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions