Job Description P16682 Confidence 85.64% Date Thu Jan 5 11:35:27 GMT 2012 Rank 150 Aligned Residues 189 % Identity 15% Template d1pdaa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.76

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	.	.	.	.	.	.	.	.	.	.	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																																				.	.	.	.	.	.	.	.	.	.																					.
Template Conservation										.	.																																																																		.
Template Sequence		D	N	V	L	R	I	A	T	.	.	R	Q	S	P	L	A	L	W	Q	A	H	Y	V	K	D	K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	T	R	G	D	V	I	G	K	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	M	K	D	.	V	P	V	E
Template Known Secondary structure										.	.			S																			T	T																			T	T	T									T	T	S		S						G	G	G	.	S		S
Template Predicted Secondary structure										.	.																																																																		.
Template SS confidence
		3	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	.	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T
Query Conservation																																								.
Alig confidence																		.	.	.	.										.	.	.							.								.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																		.	.	.	.										.	.	.															.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		F	P	Q	G	L	G	L	V	T	I	C	E	R	E	D	P	.	.	.	.	R	D	A	F	V	S	N	N	Y	.	.	.	D	S	L	D	A	L	P	A	G	S	I	V	G	T	.	.	.	.	.	.	.	.	.	.	.	S	S	L	R	R	Q	C	Q	L	A	E	R	R	P	.	.	.	.	D	L	I	I	R
Template Known Secondary structure				T	T													.	.	.	.							S	S		.	.	.	S	S	T	T	T	S		T	T						.	.	.	.	.	.	.	.	.	.	.														T	.	.	.	.	T	S
Template Predicted Secondary structure																		.	.	.	.										.	.	.															.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.												.	.	130	.	.	.	.	.	.	.	.	.	140	.					.	.	.	.	.
		179	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																																																				.	.	.	.	.
Query SS confidence				.																																																				.	.	.	.	.
Query Sequence		V	N	.	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	.	.	.	.	.	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y
Query Conservation				.																																																				.	.	.	.	.
Alig confidence				.																																			.	.	.	.														.	.	.	.	.								.
Template Conservation																																							.	.	.	.																										.
Template Sequence		S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	L	K	R	L	G	L	E	S	R	I	.	.	.	.	R	A	A	L	P	P	E	I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	.	D	S	R	T	R	E	L	L	A
Template Known Secondary structure					S											T	T	S		S												T	T		G	G	G		.	.	.	.	S					T	T	T	S				T	T	T	T								T	T	.									T
Template Predicted Secondary structure																																							.	.	.	.																										.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions