Job Description P16682 Confidence 98.39% Date Thu Jan 5 11:35:27 GMT 2012 Rank 94 Aligned Residues 111 % Identity 17% Template d1jw1a2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 4.00

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	.	.	.	.	.	.	.	.	.	.	.	S	P	G	Y	W	S	V	L
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		Q	Q	W	S	E	Q	S	G	Q	N	V	T	C	A	T	A	S	T	T	D	D	C	I	A	L	V	L	K	G	E	A	D	A	L	S	L	D	G	G	Y	I	Y	T	A	G	K	.	C	G	L	V	P	V	M	A	E	N	R	K	S	S	K	H	S	S	L	D	C	V	L	R	P	T	E	G	Y	L	A	V	A
Template Known Secondary structure		G	G	T	T	T	T	S	S	S	S							S	S	S	S	S					T	T	T	T	S			B					T					S	S	S	S	.	S	S									B			S	T	T	T	T	S		S	T	T	S
Template Predicted Secondary structure																																																.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I
Query Conservation
Alig confidence																			.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		V	V	K	K	A	N	E	G	L	T	W	N	S	L	K	G	K	.	.	.	.	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M	G	L	I	A	N	Q	T	G	S
Template Known Secondary structure		B			T	T		T	T		S	G	G	G		T	T	S	.	.	.	.				B	S	S	S	S		T	T	T	T					T	T	T	T	T	T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.					.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions