Job Description P16682 Confidence 65.94% Date Thu Jan 5 11:35:27 GMT 2012 Rank 179 Aligned Residues 198 % Identity 10% Template d1ixca2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.20

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V
Query Conservation
Alig confidence																						.	.	.																.																						.	.	.	.	.
Template Conservation																						.	.	.																.																						.	.	.	.	.
Template Sequence		E	L	S	V	A	Y	F	G	T	P	I	Y	R	S	L	P	L	L	L	R	.	.	.	A	F	L	T	S	T	P	T	A	T	V	S	L	T	H	.	X	T	K	D	E	Q	V	E	G	L	L	A	G	T	I	H	V	G	F	S	R	.	.	.	.	.	F	F	P	R	H	P	G	I	E	I	V	N	I	A	Q
Template Known Secondary structure									S	G	G	G	G	T								.	.	.							T	T								.													T	S		S					S	.	.	.	.	.						T	T
Template Predicted Secondary structure																						.	.	.																.																						.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.
Query SS confidence																						.	.	.	.	.
Query Sequence		A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	.	.	.	.	.	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	T	N
Query Conservation																						.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.												.	.	.	.	.										.	.	.	.																															.	.
Template Conservation				.	.	.	.	.	.	.																										.	.	.	.																															.	.
Template Sequence		E	D	.	.	.	.	.	.	.	L	Y	L	A	V	H	R	S	Q	S	G	K	F	G	K	T	C	K	L	A	D	L	R	A	V	.	.	.	.	E	L	T	L	F	P	R	G	G	R	P	S	F	A	D	E	V	I	G	L	F	K	H	A	G	I	E	P	R	I	.	.	A	R	V	V	E	D	A	T	A	A
Template Known Secondary structure				.	.	.	.	.	.	.							G	G	G	G	G	G	T		S				G	G	G	G	T	T		.	.	.	.								S	S	S	S													T	T						.	.					S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.																										.	.	.	.																															.	.
Template SS confidence
		163	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T
Query Conservation
Alig confidence															.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		L	A	L	T	X	A	G	A	A	S	S	I	V	.	.	.	.	.	.	P	A	S	V	A	A	I	R	W	P	D	I	A	F	A	R	I	V	G	T	R	V	K	V	P	I	S	C	I	F	R	K	E	K	Q	P	P	I	L	A	R	F	V	E	H	V	R	R	S	A	K	D
Template Known Secondary structure							T	T	S		B				.	.	.	.	.	.						T	S			T	T									T	T											S	S	S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.							.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions