 |
Job Description | P16682 | Confidence | 81.25% | Date | Thu Jan 5 11:35:27 GMT 2012 |
Rank | 157 | Aligned Residues | 78 |
% Identity | 5% | Template | d1elja_ |
SCOP info | Periplasmic binding protein-like II
| Periplasmic binding protein-like II
| Phosphate binding protein-like
|
Resolution | 1.85 |
|
 |
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
. | 80 | . | . | . | . | . | |
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |  |  |  |
|
|
|  | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | K | A | L | N | F | G | I | I | S | T | E | S | Q | Q | N | L | K | P | Q | W | T | P | F | L | Q | D | M | E | K | K | L | G | V | K | V | N | A | F | F | A | P | D | Y | A | G | I | I | Q | . |
G | M | R | F | N | K | V | . |
D | I | A | W | Y | G | N | L | S | A | M | E | A | V | D | R | A | N | G | Q | V |
Query Conservation |   |
  |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
| . |
|
|   |   |
|   |
| . |
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
K | I | E | E | G | K | V | V | I | W | H | A | M | Q | P | N | E | . |
L | E | V | F | Q | S | L | A | E | E | Y | M | A | L | P | E | V | E | I | V | F | E | Q | K | P | N | L | E | D | A | L | K | A | A | I | P | T | G | Q | G | P | D | L | F | I | W | A | H | D | W | I | G | K | F | A | E | A | G | L | L | E | P |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | T | T | T | T |
| S |
| S |  |  |  |  |  | G | G | G |  |  |  |  |  |  | T | T |
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
107 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
F |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
I |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
82 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|