Job Description P16682 Confidence 98.97% Date Thu Jan 5 11:35:27 GMT 2012 Rank 51 Aligned Residues 197 % Identity 19% Template d1dtza2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.65

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		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	.	.	.	.	.	.	.	.	.	.	.	Y	W	S	V	L
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.
Template Sequence		Q	E	W	S	R	Q	S	N	Q	S	V	V	C	A	T	A	S	T	T	E	D	C	I	A	L	V	L	K	G	E	A	D	A	L	S	L	D	G	G	Y	I	Y	I	A	G	K	.	C	G	L	V	P	V	L	A	E	S	Q	Q	S	P	E	S	S	G	L	D	C	V	H	R	P	V	K	G	Y	L	A	V	A
Template Known Secondary structure									T	T	S							S	S										T	T	S			B													T	.	T	T												T	T				S		T	T	T	S						B
Template Predicted Secondary structure																																																.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		V	V	R	K	A	N	D	K	I	T	W	N	S	L	R	G	K	.	.	.	.	K	S	C	H	T	A	V	D	R	T	A	G	W	N	I	P	M	G	P	L	F	K	D	T	D	S	C	R	F	D	E	F	F	S	Q	S	C	A	P	G	S	D	P	R	S	K	L	C	A	L	C	A	G	N	E	E	G	Q	L
Template Known Secondary structure					S	S			S			T	T	T	T	T	T	S	.	.	.	.					S		T	T		T	T	T	T	T	T	T	T	T	T	T	S	S	S	S					T	T	S	S	S	S					T	T	S		T	T	S	T	T	B	S	S				B	T	T	T	B
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.					.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
						174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.	.	.	.	220	.	.	.	.															.	.	.	.
Predicted Secondary structure		.	.	.	.																																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	F	K	R	T	V	N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	.	.	.	.	.	.	.	A	P	E	K	L	K	E	L	K	V	I	W	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	L	I
Query Conservation		.	.	.	.																																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.									.																														.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		K	C	V	P	N	S	S	E	R	L	Y	G	.	Y	T	G	A	F	R	C	L	A	E	N	V	G	D	V	A	F	V	K	D	V	T	V	L	D	N	T	D	G	K	G	T	E	Q	W	A	K	D	L	K	L	G	D	F	E	L	L	C	L	N	G	T	R	K	P	V	T	E	A	E	S	C	H	L	P	V	A
Template Known Secondary structure		S	S		S	S	T	T	S	T	T			.										T	T	S		S										T	T	S		S	S		S	S	S	S	T	T	S	S			S	T	T						T	T	S					G	G	G	G	G	G	S		S		B
Template Predicted Secondary structure														.
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	N	H	A	V	V	S	R	I	D	K	V	A	H	L	R	Q	V	L	L	R	Q	Q	A	H	F	G	R	N
Template Known Secondary structure										T	T	T																S	T	T
Template Predicted Secondary structure
Template SS confidence
		593	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions