Job Description P16682 Confidence 36.03% Date Thu Jan 5 11:35:27 GMT 2012 Rank 222 Aligned Residues 205 % Identity 13% Template d1al3a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A
Query Conservation
Alig confidence																									.	.	.																	.																									.	.	.	.	.
Template Conservation																									.	.	.																	.																									.	.	.	.	.
Template Sequence		D	K	G	S	L	Y	V	A	T	T	H	T	Q	A	R	Y	A	L	P	G	V	I	K	.	.	.	G	F	I	E	R	Y	P	R	V	S	L	H	M	H	Q	G	.	S	P	T	Q	I	A	E	A	V	S	K	G	N	A	D	F	A	I	A	T	E	A	L	H	.	.	.	.	.	L	Y	D	D	L	V	M	L
Template Known Secondary structure																		T	S						.	.	.							T										.											T	T			S					S	S				.	.	.	.	.	T	T	S
Template Predicted Secondary structure																									.	.	.																	.																									.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.						.	.	.	.	.	.	160	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	.	.	.	.	.	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H
Query Conservation																									.	.	.	.	.
Alig confidence								.	.	.	.	.	.												.	.	.	.	.										.	.	.	.																			.	.										.	.	.
Template Conservation								.	.	.	.	.	.																										.	.	.	.																			.	.										.	.	.
Template Sequence		P	C	Y	H	W	N	.	.	.	.	.	.	R	S	I	V	V	T	P	E	H	P	L	A	T	K	G	S	V	S	I	E	E	L	A	Q	Y	.	.	.	.	P	L	V	T	Y	T	F	G	F	T	G	R	S	E	L	D	T	A	.	.	F	N	R	A	G	L	T	P	R	.	.	.	I	V	F	T	A	T	D
Template Known Secondary structure								.	.	.	.	.	.							T	T	S	T	T	T	T	T	S									T	S	.	.	.	.							T	T	S	T	T								.	.					T					.	.	.						S	S
Template Predicted Secondary structure								.	.	.	.	.	.																										.	.	.	.																			.	.										.	.	.
Template SS confidence
		162	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.						.	.
Query SS confidence																																																				.	.						.	.
Query Sequence		E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	.	.	V	W	R	K	N	.	.	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T	P	E
Query Conservation																																																				.	.						.	.
Alig confidence																															.	.	.	.	.	.																.	.						.	.
Template Conservation																															.	.	.	.	.	.
Template Sequence		A	D	V	I	K	T	Y	V	R	L	G	L	G	V	G	V	I	A	S	M	A	V	D	P	V	S	D	P	D	.	.	.	.	.	.	L	V	K	L	D	A	N	G	I	F	S	H	S	T	T	K	I	G	F	R	R	S	T	F	L	R	S	Y	M	Y	D	F	I	Q	R	F	A	P	H	L	T	R	D	V	V
Template Known Secondary structure												T	S							G	G	G			T	T	T		T	T	.	.	.	.	.	.	S						B	T	T	B											T	T																T	T
Template Predicted Secondary structure																															.	.	.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.							.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions