Job Description P16682 Confidence 99.71% Date Thu Jan 5 11:35:27 GMT 2012 Rank 23 Aligned Residues 223 % Identity 14% Template c3tqwA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:methionine-binding protein; PDBTitle: structure of a abc transporter, periplasmic substrate-binding protein2 from coxiella burnetii Resolution 2.00 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		X	V	R	V	G	T	I	A	G	P	E	T	.	.	.	.	Q	L	X	E	V	A	K	Q	V	A	L	N	R	Y	G	L	H	V	N	I	I	T	F	S	D	Y	N	T	P	N	E	A	L	A	D	G	S	V	D	A	N	X	F	Q	H	L	P	Y	L	K	A	Q	I	E	X	R	G	Y	K	I	V	S	I	G
Template Known Secondary structure									T	T				.	.	.	.																								S		T	T	S							T	T	S		S
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.													170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	.	.	.	.	.	.	.	.	.	.	.	.	I	S	A	S	D	F	K	R	T	V
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																.	.							.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																.	.							.	.	.	.	.	.
Template Sequence		K	T	F	V	Y	P	X	.	.	.	G	L	Y	S	K	K	I	T	A	L	T	Q	L	K	T	.	.	G	A	K	I	A	V	.	.	.	.	.	.	P	S	D	P	S	N	E	A	R	A	L	L	L	L	E	K	A	Q	L	I	Q	L	K	T	H	I	N	A	T	P	X	D	I	A	S	N	P	K	K	L	K
Template Known Secondary structure									.	.	.					S	S		S	S	G	G	G			T	.	.	T						.	.	.	.	.	.			S														T	T	S											G	G	G					T	T
Template Predicted Secondary structure									.	.	.																.	.							.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T	P	E
Query Conservation
Alig confidence																																				.	.	.	.	.																																					.
Template Conservation																																				.	.	.	.	.																																					.
Template Sequence		I	V	E	L	D	A	A	Q	L	S	R	S	L	G	D	V	D	L	A	A	I	N	T	N	Y	A	I	P	A	G	L	S	P	S	.	.	.	.	.	R	D	A	L	L	T	E	G	P	N	S	P	Y	A	N	V	V	A	V	R	E	D	D	K	N	D	P	R	L	K	Q	L	V	S	A	L	.	H	S	P	A
Template Known Secondary structure							G	G	G	G	G	G		T	T	T		S										G	G	G	T			T	T	.	.	.	.	.	T	T		S					S	S	S	S									G	G	G	T	T												.	T	S
Template Predicted Secondary structure																																				.	.	.	.	.																																					.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	V	L	E	R	L	G	W	A	P	F	R	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	S	A	A	K	K	I	F	G	D	G	A	I	P	A
Template Known Secondary structure											G	G	G
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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