Job Description P16682 Confidence 79.25% Date Thu Jan 5 11:35:27 GMT 2012 Rank 159 Aligned Residues 56 % Identity 9% Template c3ombA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:extracellular solute-binding protein, family 1; PDBTitle: crystal structure of extracellular solute-binding protein from2 bifidobacterium longum subsp. infantis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.				.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.														.
Query SS confidence																							.	.	.														.
Query Sequence		P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	.	.	.	Y	A	G	I	I	Q	G	M	R	F	N	K	V	.	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F
Query Conservation																							.	.	.														.
Alig confidence																							.	.	.														.
Template Conservation
Template Sequence		Q	W	A	K	D	L	E	A	D	C	D	C	K	I	E	W	Q	E	V	T	R	E	A	W	A	Q	Q	K	N	A	T	L	A	S	G	D	I	A	D	V	N	L	N	G	Y	G	A	V	E	A	Y	Q	Y	P	G	X	F	E	D	L
Template Known Secondary structure												T	S																							T				S				S	S			T						S	T	T	S	B			G
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions