Job Description P16682 Confidence 98.52% Date Thu Jan 5 11:35:27 GMT 2012 Rank 86 Aligned Residues 218 % Identity 13% Template c3muqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a conserved functionally unknown protein from2 vibrio parahaemolyticus rimd 2210633 Resolution 2.05 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	.	.	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A
Query Conservation																				.	.
Alig confidence											.	.	.	.	.					.	.																							.
Template Conservation											.	.	.	.	.																													.
Template Sequence		E	H	V	R	L	A	T	T	T	.	.	.	.	.	S	T	Y	H	S	G	L	L	D	Y	L	L	P	Q	F	E	K	D	T	G	Y	K	V	D	V	I	A	A	.	G	T	G	K	A	L	K	X	G	E	N	G	D	V	D	L	V	X	T	H	A	P	K	A	E	G	T	F	V	E	K	G	Y	G	V	L	P
Template Known Secondary structure											.	.	.	.	.						T	G	G	G	G	T																		.											T	T	S	S	S																T	T	S
Template Predicted Secondary structure											.	.	.	.	.																													.
Template SS confidence
		27	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																								.	.											.	.	.	.
Query SS confidence																								.	.											.	.	.	.
Query Sequence		Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	.	.	I	N	N	L	N	D	L	L	A	K	.	.	.	.	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G
Query Conservation																								.	.											.	.	.	.
Alig confidence									.	.	.	.	.											.	.											.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		R	K	L	X	Y	N	D	.	.	.	.	.	F	V	I	V	G	P	K	A	D	P	A	K	I	K	D	D	E	S	V	L	D	V	F	K	E	I	A	N	K	N	A	T	F	I	S	R	G	D	D	S	G	T	H	K	K	E	X	G	F	W	A	Q	T	K	I	E	P	N	F	G	G	Y	R	S	V	G	Q	G
Template Known Secondary structure									.	.	.	.	.							T	T		T	T			T	T		S												T	T								S		S														T					S	T	T
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.
Query Sequence		H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	.	.	.	.	.	.	.	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G
Query Conservation																																																								.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.																			.	.	.	.	.	.	.																	.	.	.
Template Conservation																																.	.	.	.	.	.																																										.	.	.
Template Sequence		X	G	P	T	L	N	X	A	S	E	X	Q	G	Y	T	X	S	D	R	G	T	W	L	A	Y	Q	N	K	L	D	.	.	.	.	.	.	L	E	I	L	F	Q	G	D	E	K	L	F	N	P	Y	Q	V	I	L	V	N	P	E	R	Y	P	T	I	N	Y	Q	G	A	K	A	F	S	D	W	L	V	.	.	.
Template Known Secondary structure													T														G	G	G		S	.	.	.	.	.	.									G	G	G											T	T	T		T	T	S														.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.																																										.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	P	E	E	K	A	V	L	E	R	L	G	W
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	N	P	R	G	Q	E	L	I	N	G	F	R	L
Template Known Secondary structure		.	S
Template Predicted Secondary structure		.
Template SS confidence
			247	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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