Job Description P16682 Confidence 98.50% Date Thu Jan 5 11:35:27 GMT 2012 Rank 89 Aligned Residues 226 % Identity 15% Template c3lr1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:tungstate abc transporter, periplasmic tungstate- PDBTitle: the crystal structure of the tungstate abc transporter from2 geobacter sulfurreducens Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A
Query Conservation
Alig confidence																				.	.	.																									.
Template Conservation																				.	.	.																									.
Template Sequence		A	E	E	R	L	K	X	S	T	T	T	S	T	Q	D	S	G	L	.	.	.	L	K	V	L	L	P	P	F	E	K	K	N	N	V	K	V	D	V	I	A	V	G	T	G	.	Q	A	L	K	L	G	E	A	G	D	V	D	V	V	F	V	H	A	R	K	L	E	D	K	F	V	A	D	G	F	G	V	N	R
Template Known Secondary structure			S																	.	.	.													T												.								T	T	S		S																T	T	S
Template Predicted Secondary structure																				.	.	.																									.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																								.	.																								.	.	.
Query SS confidence																								.	.																								.	.	.
Query Sequence		Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	.	.	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	.	.	.	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H
Query Conservation																								.	.																								.	.	.
Alig confidence									.	.	.	.	.											.	.																								.	.	.																													.	.
Template Conservation									.	.	.	.	.																																																																			.	.
Template Sequence		K	D	V	X	Y	N	D	.	.	.	.	.	F	V	I	V	G	P	K	N	D	P	A	G	I	A	K	A	K	T	A	A	E	A	L	K	L	L	A	T	K	G	A	T	F	I	S	R	G	D	K	S	G	T	H	T	K	E	L	D	L	W	K	S	A	G	V	D	P	K	G	N	W	Y	V	E	A	G	.	.
Template Known Secondary structure									.	.	.	.	.							T	T		T	T		G	G	G		S	S												T								S	S	S													T	T					S	S	S						.	.
Template Predicted Secondary structure									.	.	.	.	.																																																																			.	.
Template SS confidence
		76	.	.	.	80	.	.						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T	P	E	E	K	A	V
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		Q	G	X	G	P	V	I	T	X	A	T	E	R	R	A	Y	T	L	T	D	R	G	T	Y	N	A	F	K	G	A	K	.	.	T	D	L	V	I	L	F	Q	G	L	F	N	P	Y	G	I	X	A	V	N	P	K	K	F	P	H	V	K	Y	D	L	A	X	K	L	I	D	Y	V	T	G	P	E	G	L	K	I
Template Known Secondary structure		S													T														B	T	T	T	.	.	B																				T	T	T		T	T	S													T	S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		264	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	D	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions