Job Description P16682 Confidence 98.60% Date Thu Jan 5 11:35:27 GMT 2012 Rank 82 Aligned Residues 214 % Identity 12% Template c3h7mA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of a histidine kinase sensor domain with2 similarity to periplasmic binding proteins Resolution 2.40 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.							50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																						.			.	.	.	.	.	.
Query SS confidence																						.			.	.	.	.	.	.
Query Sequence		E	Q	E	K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	.	P	Q	.	.	.	.	.	.	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	N	L	S	A	M	E	A	V	D
Query Conservation																						.			.	.	.	.	.	.
Alig confidence																						.			.	.	.	.	.	.																							.
Template Conservation																																																					.
Template Sequence		D	R	H	R	T	I	V	V	G	G	D	R	D	Y	P	P	Y	E	F	I	D	Q	N	G	K	P	A	G	Y	N	V	E	L	T	R	A	I	A	E	V	M	G	M	T	V	E	F	R	L	G	A	.	W	S	E	M	F	S	A	L	K	S	G	R	V	D	V	L	Q	G	I	S	W	S	E	K	R	A	R	Q
Template Known Secondary structure			S	S	S								T			T	T	T					T	T	S				S														T										.	G	G	G							T	T	S	S	S													T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.																						.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.																						.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	F	T	P	P	H	T	I	V	Y	.	.	.	.	.	.	.	.	H	A	I	F	A	R	R	D	S	P	P	A	A	G	L	E	D	L	R	G	R	.	.	.	.	K	V	A	L	H	R	D	G	I	M	H	E	Y	L	A	.	.	.	.	.	.	.	.	.	.	E	R	G	Y	G	K	D	L	V	L	T
Template Known Secondary structure													.	.	.	.	.	.	.	.							S	S	S				S	S	G	G	G	G	T	T	S	.	.	.	.						T	T	S								.	.	.	.	.	.	.	.	.	.	T	T	T		G	G	G
Template Predicted Secondary structure													.	.	.	.	.	.	.	.																						.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.											.	180	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	T	P	E	E
Query Conservation
Alig confidence																																				.	.																							.
Template Conservation																																				.	.																							.
Template Sequence		P	T	P	A	D	A	L	R	L	L	A	A	G	G	C	D	Y	A	V	V	A	M	V	P	G	M	Y	I	I	R	E	N	R	L	.	.	T	N	L	V	P	V	A	R	S	I	A	A	Q	R	Y	G	Y	A	V	R	Q	G	.	D	A	E	L	L	A	R	F	S	E	G	L	A	I	L	R	K	T	G	Q	Y
Template Known Secondary structure		S	S										T	T	S	S	S																T	T		.	.	T	T																			T	T	.																			T
Template Predicted Secondary structure																																				.	.																							.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		261	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	L	E	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	I	R	A	K	W
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions