Job Description P16682 Confidence 98.62% Date Thu Jan 5 11:35:27 GMT 2012 Rank 81 Aligned Residues 226 % Identity 10% Template c3fxbB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:trap dicarboxylate transporter, dctp subunit; PDBTitle: crystal structure of the ectoine-binding protein ueha Resolution 2.90 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	G	V	K	V	N	A	F	F	A	.	.	.	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																							.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		D	T	W	R	Y	A	F	E	E	A	M	T	D	V	Q	G	V	.	Y	A	Q	K	F	K	E	E	I	E	A	N	S	D	H	E	I	Q	L	F	P	Y	G	T	L	G	E	S	A	D	I	M	E	Q	T	Q	D	G	I	L	Q	F	V	D	Q	S	P	G	F	T	G	S	L	I	P	E	A	Q	V	F	F	V
Template Known Secondary structure									S	S		S	S	S					.												S	S	S								T	T	S	S		S											T	S		S										T	T	T	S	G	G	G	G	G	G	G	S
Template Predicted Secondary structure																			.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
					89	90	.	.	.	.	.	.	.	.	.																100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	W	Y	G	N	L	S	A	M	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	W	S	V	L	I	V	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D
Query Conservation		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		P	Y	L	L	P	T	D	Q	D	H	L	A	R	F	F	K	E	S	K	A	I	N	D	M	F	K	P	L	Y	A	D	Q	G	L	E	L	L	N	M	F	P	E	G	E	.	.	.	.	.	.	.	.	V	A	M	T	T	K	T	P	V	T	T	C	S	D	L	D	E	V	K	F	R	V	.	.	.	.	.	.
Template Known Secondary structure		T	T		S		S																	T	T	S						T	T	T												.	.	.	.	.	.	.	.						S	S			S	S	G	G	G	S	T	T						.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G
Query Conservation
Alig confidence						.	.	.	.												.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation						.	.	.	.												.	.	.	.	.	.	.																																								.	.	.	.
Template Sequence		M	T	N	P	.	.	.	.	L	L	V	E	S	Y	K	A	F	G	A	.	.	.	.	.	.	.	T	P	T	P	L	P	W	G	E	V	Y	G	G	L	Q	T	N	V	I	Q	G	Q	E	N	P	T	F	F	L	Y	S	T	K	I	Y	E	V	T	D	.	.	.	.	Y	I	T	Y	A	G	H	N	N	F	T
Template Known Secondary structure			S			.	.	.	.										T	S	.	.	.	.	.	.	.							G	G	G							T	T	S														T	T	G	G	G	S			.	.	.	.
Template Predicted Secondary structure						.	.	.	.												.	.	.	.	.	.	.																																								.	.	.	.
Template SS confidence
		146	.	.	.					150	.	.	.	.	.	.	.	.	.	160								.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.					200	.	.	.	.	.	.	.	.	.	210
		231	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.											.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	I	V	W	R	K	N	.	.	.	.	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K	.	.	.	.	.	.	.	.	.	.	T	P	E	E	K	A	V	L	E	R	L	G	W	A	P	F	R	A	S	S	D	L	Q	L	V	P	I	R	Q	L
Query Conservation										.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	V	M	A	N	K	D	F	Y	D	G	L	S	A	E	D	Q	Q	L	V	Q	N	A	A	L	A	A	Y	D	H	T	V	V	Y	Q	Q	Q	A	A	D	T	E	L	A	K	I	M	E	A	K	P	E	M	Q	V	T	V	L	T	D	E	Q	R	S	C	F	K	E	A
Template Known Secondary structure														S																												T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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