Job Description P16682 Confidence 98.54% Date Thu Jan 5 11:35:27 GMT 2012 Rank 84 Aligned Residues 170 % Identity 15% Template c3e79A_ PDB info PDB header:tpp binding protein Chain: A: PDB Molecule:high affinity transport system protein p37; PDBTitle: structure determination of the cancer-associated mycoplasma2 hyorhinis protein mh-p37 Resolution 1.90 Å

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		117	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																												.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																																												.	.
Query Sequence		P	G	Y	W	S	V	L	I	V	.	.	.	.	.	.	.	.	.	.	N	K	D	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	D	F	K	R	T	V	N	A	G	H	E	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.																																																												.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																.	.	.	.																																									.	.
Template Conservation																																				.	.	.	.
Template Sequence		N	F	Y	R	G	M	I	W	I	K	G	N	D	E	T	L	A	K	I	K	K	A	W	N	D	K	D	W	N	T	F	R	N	F	.	.	.	.	G	I	L	H	G	K	D	N	S	S	S	K	F	K	L	E	E	T	I	L	K	N	H	F	Q	N	K	F	T	T	L	N	E	D	R	S	A	H	P	N	A	Y
Template Known Secondary structure		S		B									S													T	T								T	.	.	.	.							T	T		T	T	T	T											S	T	T	S		S										G	G	G
Template Predicted Secondary structure																																				.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
			185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.									.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.																							.	.	.	.	.	.	.	.
Query SS confidence		.																							.	.	.	.	.	.	.	.
Query Sequence		.	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	.	.	.	.	.	.	.	.	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G
Query Conservation		.																							.	.	.	.	.	.	.	.
Alig confidence		.																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	K	S	A	D	T	L	G	T	L	D	D	F	H	I	A	F	S	E	E	G	S	F	A	W	T	H	N	K	S	A	T	K	P	F	E	T	K	A	N	E	K	M	E	A	L	I	V	T	N	P	I	P	Y	D	V	G	V	F	R	K	S	V	N	Q	L	E	Q	N	L	I	V	Q	T	F	I	N	L	A
Template Known Secondary structure						G	G	G	G	G	G		T	T								T	T	G	G	G	G	S		T	T		T	T		T	T				T	T												B									T	T	B
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	P	E	E	K	A	V	L	E	R	L	G	W	A	P	F	R	A	S	S	D	L	Q	L	V	P	I	R	Q	L	A	L	F	K	E
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		K	N	K	Q	D	T	Y	G	P	L	L	.	G	Y	N	G	Y	K	K	I	D	N	F	Q	K	E	I	V	E	V	Y	E	K	A	I	K
Template Known Secondary structure			T	T			S	S	G	G	G	T	.	T								S						T
Template Predicted Secondary structure													.
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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