Job Description P16682 Confidence 65.91% Date Thu Jan 5 11:35:27 GMT 2012
Rank 180 Aligned Residues 81
% Identity 12% Template c2z8fB_
PDB info
PDB header: sugar binding proteinChain: B: PDB Molecule: galacto-n-biose/lacto-n-biose i transporter substrate-
PDBTitle: the galacto-n-biose-/lacto-n-biose i-binding protein (gl-bp) of the2 abc transporter from bifidobacterium longum in complex with lacto-n-3 tetraose
Resolution 1.65 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
27 . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
E E Q E K A L N F G I I S T E S Q Q N L K P Q W T P F L Q D M E K K L .
G V K V N A F F A P D .
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Y A G I I Q G M R F N K V .
D I A W Y G N L S A M E A V
Query Conservation  
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Alig confidence  
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Template Conservation  
                                                                                                                             
Template Sequence  
T D D G G V V N I T Y M H R L P D S E G M T L V N D I V A K W N K Q H P D I Q V K A T K F D G K A S D M I K K L E T D V K S G E A P D L A Q V G Y A E L P E V F
Template Known Secondary structure  
S T T S T T S S G G G T S T T T
Template Predicted Secondary structure  
Template SS confidence  
   
36 . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . .
 
   
100 . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
D R A N G Q V F
Query Conservation  
               
Alig confidence  
Template Conservation  
         
Template Sequence  
T K G L L Q D V
Template Known Secondary structure  
T T B
Template Predicted Secondary structure  
Template SS confidence  
   
116 . . . 120 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]