Job Description P16682 Confidence 42.58% Date Thu Jan 5 11:35:27 GMT 2012 Rank 208 Aligned Residues 74 % Identity 12% Template c2i58B_ PDB info PDB header:sugar binding protein Chain: B: PDB Molecule:sugar abc transporter, sugar-binding protein; PDBTitle: crystal structure of rafe from streptococcus pneumoniae complexed with2 raffinose Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.		.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																.																		.								.									.	.
Query SS confidence																																.																		.								.									.	.
Query Sequence		A	L	N	F	G	I	I	S	T	E	S	Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	L	.	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	.	G	M	R	F	N	K	V	.	D	I	A	W	Y	G	N	L	.	.	S	A	M	E	A	V	D	R	A	N	G	Q	V
Query Conservation																																.																		.								.									.	.
Alig confidence										.	.																					.																		.								.									.	.
Template Conservation										.	.
Template Sequence		T	V	T	I	E	Y	F	N	.	.	Q	K	K	E	M	T	K	T	L	E	E	I	T	R	D	F	E	K	E	N	P	K	I	K	V	K	V	V	N	V	P	N	A	G	E	V	L	K	T	R	V	L	A	G	D	V	P	D	V	V	N	I	Y	P	Q	S	I	E	L	Q	E	W	A	K	A	G	V	F	E	D
Template Known Secondary structure										.	.			G	G	G													T	T		T	T									S	S											T	T				S						T	T	S									T	T		B
Template Predicted Secondary structure										.	.
Template SS confidence
		5	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		107
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		83

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions