Return to main results Retrieve Phyre Job Id

Job DescriptionP16682
Confidence24.23%DateThu Jan 5 11:35:27 GMT 2012
Rank243Aligned Residues35
% Identity14%Templatec2d5wA_
PDB info PDB header:peptide binding proteinChain: A: PDB Molecule:peptide abc transporter, peptide-binding protein; PDBTitle: the crystal structure of oligopeptide binding protein from thermus2 thermophilus hb8 complexed with pentapeptide
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90........
Predicted Secondary structure 








Query SS confidence 


































Query Sequence  KVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEA
Query Conservation   
      
     


  
 



   
  
  
Alig confidence 


































Template Conservation   
              
  



            
Template Sequence  KVVYRFIQNTNSLLVAVIGGSIDATSSVSLTFDQG
Template Known Secondary structure 
SST

S
SSS

Template Predicted Secondary structure 










Template SS confidence 


































   246...250.........260.........270.........280
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions