Job Description P16682 Confidence 97.11% Date Thu Jan 5 11:35:27 GMT 2012 Rank 116 Aligned Residues 213 % Identity 13% Template c1twyG_ PDB info PDB header:structural genomics, unknown function Chain: G: PDB Molecule:abc transporter, periplasmic substrate-binding protein; PDBTitle: crystal structure of an abc-type phosphate transport receptor from2 vibrio cholerae Resolution 1.65 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																				.																																.
Query SS confidence																				.																																.
Query Sequence		Q	Q	N	L	K	P	Q	W	T	P	F	L	Q	D	M	E	K	K	.	L	G	V	K	V	N	A	F	F	A	P	D	Y	A	G	I	I	Q	G	M	R	F	N	K	V	D	I	A	W	Y	G	.	N	L	S	A	M	E	A	V	D	R	A	N	G	Q	V	F	A	Q	T	V	A	A	D	G	S	P	G	Y	W
Query Conservation																				.																																.
Alig confidence																				.													.																			.																							.	.	.	.	.	.	.
Template Conservation																																	.																																										.	.	.	.	.	.	.
Template Sequence		S	T	S	V	A	R	I	X	D	V	L	A	E	K	Y	N	Q	Q	H	P	E	T	Y	V	A	V	Q	G	V	G	S	.	T	A	G	I	S	L	L	K	K	G	V	A	D	I	A	X	T	S	R	Y	L	T	E	S	E	A	Q	N	T	L	H	T	F	T	L	A	F	D	G	L	A	.	.	.	.	.	.	.
Template Known Secondary structure																					T	T								S			.									T	T	S		S					S	S				T	T	T			T	T													.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.																																										.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		121	.	.	.	.	.	.	.																	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Query Sequence		S	V	L	I	V	N	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	I	N	N	L	N	D	L	L	A	K	R	K	D	L	T	F	G	N	G	D	P	N	S	T	S	G	F	L	V	P	G	Y	Y	V	F	A	K	N	N	I	S	A	S	.	.	.	.	D	F	K	R	T	V	N
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Alig confidence		.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	I	V	V	N	Q	A	N	P	V	T	N	L	T	R	E	Q	L	Y	G	I	Y	K	G	Q	I	T	N	W	K	Q	V	G	G	N	D	Q	K	I	A	V	V	T	R	E	A	S	S	G	T	R	Y	S	F	E	S	L	X	G	L	T	K	T	V	K	D	R	E	V	S	D	V	A	P	T	A	L	V	V
Template Known Secondary structure		.	.					T	T																	T	S			B	G	G	G	G	T	S		S		B								T	T												T						S	S	S					S		T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		A	G	H	E	T	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	N	N	T	E	N	L	D	K	L	K	T	S	A	P	E	K	L	K	E	L	K	V	I	W	.	.	.	.	K	S	P	L	I	P	G	D	P	I	V	W	R	K	N	L	S	E	T	T	K	D	K	I	Y	D	F	F	M	N	Y	G	K
Query Conservation																																													.	.	.	.
Alig confidence																																													.	.	.	.																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		N	S	N	S	X	X	K	T	L	V	N	H	N	T	Q	A	V	G	F	I	S	I	G	S	V	D	K	S	V	K	A	I	Q	F	E	K	A	D	P	T	S	D	N	I	A	K	H	T	Y	Q	L	S	R	P	F	L	I	L	H	Y	S	D	N	A	D	E	Q	T	K	E	F	I	A	F	L	K	.	.	.	.
Template Known Secondary structure		S	S												T	T							G	G	G			T	T	S						T	T	B									T	T			S											T	T	T													T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		257	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	E	E	K	A	V	L	E	R	L	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	S	A	K	K	L	I	V	E	Y	G	Y
Template Known Secondary structure		S										T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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