Return to main results Retrieve Phyre Job Id

Job DescriptionP43672
Confidence100.00%DateWed Jan 25 15:20:54 GMT 2012
Rank54Aligned Residues221
% Identity25%Templated2onka1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.... .....70...
Predicted Secondary structure 























.........


Query SS confidence 





























































. . . . . . . . .








Query Sequence  LISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQ. . . . . . . . . DLIVARLQQ
Query Conservation 

    

  

   

  


 
  

 




 











 
   

 
 
    .........   



 
Alig confidence 



.










..








.

































.........








Template Conservation   
 
.   
  
   
..



     .   


 








  
 
      
 
   
            
  
  
Template Sequence  FLKV. RAEKRLGNFRL. . NVDFEMGRD. YCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQ
Template Known Secondary structure 
.TT..
SS.

TTSSTSS

STT
TTS
TTTS

B


S
Template Predicted Secondary structure  .

..

.


























Template SS confidence 















































































   2... ....10...... ...20..... ....30.........40.........50.........60.........70.......
 
   74.....80.........90.........100.........110.........120.........130.........140......... 150.
Predicted Secondary structure 

















..

Query SS confidence 











































































. .

Query Sequence  DPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLD. . PN
Query Conservation          

                                                       
  

  

  ..  
Alig confidence 
















....................................






















..

Template Conservation          

   
   ....................................                
    
     
Template Sequence  DYALFPHLSVYRNIAYG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LRNVERVERDRRVREMAEKLGIAHLLD
Template Known Secondary structure  S



TTS
TT....................................
TTS
TTT
TTTTT
Template Predicted Secondary structure 











....................................












Template SS confidence 















































































   78.80.........90.... .....100.........110.........120.
 
   152.......160.........170.........180.........190.........200.. .......210.........220.......
Predicted Secondary structure 

















....







Query SS confidence 


















































. . . .
























Query Sequence  VALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTF. . . . NGTIIFISHDRSFIRNMATRIVDLD
Query Conservation       





 

 

 

   










 

      
   
   ....  








 


 
 
 
  
 
Alig confidence 


















































....
























Template Conservation       

 
    
 

 

   
 
 




   

          
  
      


 


    
    
 
 

 
Template Sequence  RKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVML
Template Known Secondary structure 

GGGS
TT

SSBSTTSS

T

S

S
Template Predicted Secondary structure 


































Template SS confidence 















































































   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   228.230.........240.........250.........260....
Predicted Secondary structure 




Query SS confidence 




































Query Sequence  RGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLA
Query Conservation   
 
    
 
  
   
                   
Alig confidence 





.





























Template Conservation   
 

 . 
   

                       
Template Sequence  NGRIVE. KGKLKELFSAKNGEVAEFLSARNLLLKVSK
Template Known Secondary structure  TT.
S

SSGGG
Template Predicted Secondary structure 

.





Template SS confidence 




































   202..... ..210.........220.........230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions