Return to main results Retrieve Phyre Job Id

Job DescriptionP43672
Confidence98.78%DateWed Jan 25 15:20:54 GMT 2012
Rank83Aligned Residues130
% Identity13%Templated2i3ba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   348.350.........360.........370........ .380.........390.........400.........410........
Predicted Secondary structure 











.........














Query SS confidence 






























. . . . . . . . .







































Query Sequence  IALIGPNGCGKTTLLKLMLGQLQADSGRIHV. . . . . . . . . GTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPR
Query Conservation 
 
 
 









 
 
      
 
  .........
    


  
    
    

 
 
              
Alig confidence 






























.........

































......
Template Conservation 


 
  
 




   
   
      
                                             ......
Template Sequence  VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRV. . . . . .
Template Known Secondary structure  S

SS
TT




TTSSTTS






SSS

S......
Template Predicted Secondary structure 

























......
Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.......
 
   419420.........430.........440.........450.........460.........470.. .......480.........490.....
Predicted Secondary structure 



















..




Query SS confidence 





















































. .






















Query Sequence  HVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLD. . VETLELLEELIDSYQGTVLLVSH
Query Conservation       
             
  





 

 

  
   
 







  

..      
   
    



 


Alig confidence  ............









































..






















Template Conservation  ............                                  

              
          
     
Template Sequence  . . . . . . . . . . . . GQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPGTIILGTIP
Template Known Secondary structure  ............SSS
TTTTTTT






SS






STTTTT
S
SS



Template Predicted Secondary structure  ............





















Template SS confidence 














































































   78.80.........90.........100.........110.........120.........130.........140....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions