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Job DescriptionP43672
Confidence100.00%DateWed Jan 25 15:20:54 GMT 2012
Rank47Aligned Residues222
% Identity26%Templated2hyda1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10..... ....20.........30.........40.........50.........60....... ..70
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Query Sequence  ISMHGAWLSFSD. . APLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLI. . . . . . . . . . . VAR
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Template Sequence  IDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGL
Template Known Secondary structure 
S
SSS

S
TT

STTSSTTTTTSS

STTGGGS
T
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   340.........350.........360.........370.........380.........390.........400.........410.........
 
   71........80.........90.........100.........110.........120.........130.........140.........150
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Query Sequence  LQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDP
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Template Sequence  VQQDNILFSD. TVKENILLGRPTATD. . . . . . . . . . . . . . . . . . . . . . . . . . . EEVVEAAKMANAHDFIMNLPQGYDTEV
Template Known Secondary structure 
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SS.BGGG
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TSTTGGG
B
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   420......... 430.........440.... .....450.........460.........470.
 
   151........160.........170.........180.........190.........200.. .......210.........220........
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Query Sequence  NVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTF. . NGTIIFISHDRSFIRNMATRIVDLDR
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Template Sequence  GERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTI. THADKIVVIEN
Template Known Secondary structure 
GGGTTS


SSTTTT

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SSGGGT.TT
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   472.......480.........490.........500.........510.........520.........530......... 540.........550
 
   229230.........240.........250.....
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Query Sequence  GKLVTYPGNYDQYLLEKEEALRVEELQ
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Template Sequence  GHIVE. TGTHRELIAKQGAYEHLYSIQ
Template Known Secondary structure  T.
TTSTTT
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   551.... ....560.........570......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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