Return to main results Retrieve Phyre Job Id

Job DescriptionP43672
Confidence99.36%DateWed Jan 25 15:20:54 GMT 2012
Rank73Aligned Residues153
% Identity14%Templated1ye8a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain)
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80.........90.........100.........110
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  RVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMN
Query Conservation   




 











 
   

 
 
       



 
        

                           
Alig confidence 


































































.............
Template Conservation 



 

 
 




   

  
    
 
                                     .............
Template Sequence  KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRRTGFRIITTEGKKKIFSSKFFTSKKLVGSYG. . . . . . . . . . . . .
Template Known Secondary structure 

TTSSGGG


TT

TT


SSTT.............
Template Predicted Secondary structure 


























.............
Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60........
 
   111........120.........130.........140.........150.........160.........170.........180.........
Predicted Secondary structure 

























.
Query SS confidence 














































































.
Query Sequence  DPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDI.
Query Conservation                              
  

  

         





 

 

 

   










 

 .
Alig confidence  .......................................







































.
Template Conservation  .......................................                               

        
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKXELFS
Template Known Secondary structure  .......................................

TT



STTGGG
Template Predicted Secondary structure  .......................................















Template SS confidence 















































































   75....80.........90.........100.........110.....
 
   190.........200.........210.........220.........230.....
Predicted Secondary structure 











Query SS confidence 













































Query Sequence  ETIDWLEGFLKTFNGTIIFISHDRSFIRNMATRIVDLDRGKLVTYP
Query Conservation       
   
     








 


 
 
 
  
  
 
    
Alig confidence 













































Template Conservation                                           

 
 
Template Sequence  KKFRDLVRQIXHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELT
Template Known Secondary structure  T
TTS

SS

ST
TT


Template Predicted Secondary structure 












Template SS confidence 













































   116...120.........130.........140.........150.........160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions