Return to main results Retrieve Phyre Job Id

Job DescriptionP43672
Confidence99.88%DateWed Jan 25 15:20:54 GMT 2012
Rank62Aligned Residues185
% Identity22%Templated1w1wa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   325....330......... 340.........350.........360.........370.........380.
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Query Sequence  VCYQVNGKQLVKDFS. AQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTK. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VGLELSNFKSYRGVTKVGFGESNFTSIIGPNGSGKSNMMDAISFVLGVLKDLIYRGPQSAYVKAFYQKGNKLVELMRIIS
Template Known Secondary structure  S
SS

S
TT
S
STTSSTT

GGGS




TT
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   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   382.......390.........400.........410.........420.........430
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFH
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Template Conservation                                                                                  
Template Sequence  RNGDTSYKIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFTFDYVSDHLDAIYRELTGNASLT
Template Known Secondary structure  TTS
TT
TT

TTT
TT
TT
TTS
T

T


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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   431........440.........450..... ....460.........470.........480...... ...490.......
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Query Sequence  . . . . . . PKRAMTPVRALSGGERNRLLLARLF. . . . LKPSNLLILDEPTNDLDVETLELLEELIDSY. . . QGTVLLVSHDR
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Template Sequence  KYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVISLKN
Template Known Secondary structure 

TT




GGGS
TSS

SSSTTTT


BTTB
S
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   1113......1120.........1130.........1140.........1150.........1160.........1170.........1180.........1190..
 
   498.500.........510
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Query Sequence  QFVDNTVTECWIF
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Template Conservation       . 
     
Template Sequence  TMFEK. SDALVGV
Template Known Secondary structure  TT.
S
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   1193.... ..1200....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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