Return to main results Retrieve Phyre Job Id

Job DescriptionP43672
Confidence99.01%DateWed Jan 25 15:20:54 GMT 2012
Rank78Aligned Residues140
% Identity17%Templated1np6a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60....... ..70.........80.........90.........
Predicted Secondary structure 

















...........









Query SS confidence 




































. . . . . . . . . . .































Query Sequence  RVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLI. . . . . . . . . . . VARLQQDPPRNVEGSVYDFVAEGIEEQAEYLK
Query Conservation   




 











 
   

 
 
       ...........



 
        

                
Alig confidence 




































...........




















...........
Template Conservation 

 


  







  
 
 
   

 
 
                                     ...........
Template Sequence  LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHELRKAGAAQTIVASQQRWALMTETPDEEELD. . . . . . . . . . .
Template Known Secondary structure 

TTS
TT






T
S
SS


SSS



...........
Template Predicted Secondary structure 





































...........
Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.......
 
   100.........110.........120.........130.........140......... 150.........160.........170.......
Predicted Secondary structure 








..










Query SS confidence 

















































. .



























Query Sequence  RYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLD. . PNVALSSLSGGWLRKAALGRALVSNPRV
Query Conservation                                         
  

  

  ..       





 

 

 

   


Alig confidence  .......................


























..



























Template Conservation  .......................                                                         
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . LQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRPEELVIDRHVIAVASDVP
Template Known Secondary structure  .......................S
GGG
SS
SS

S
TTSS

GGG



TTSS
Template Predicted Secondary structure  .......................






















Template SS confidence 















































































   90.........100.........110.........120.........130.........140......
 
   178.180........ .190.........200....
Predicted Secondary structure 







..


Query SS confidence 










. .















Query Sequence  LLLDEPTNHLD. . IETIDWLEGFLKTFNG
Query Conservation 







 

..      
   
     
Alig confidence 










..















Template Conservation 
    
   

    
   
        
Template Sequence  LNLDVALLDINDVEGLADFVVEWMQKQNG
Template Known Secondary structure 


SSTT
TT


Template Predicted Secondary structure 













Template SS confidence 




























   147..150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions