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Job DescriptionP43672
Confidence100.00%DateWed Jan 25 15:20:54 GMT 2012
Rank25Aligned Residues217
% Identity24%Templated1ji0a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MS. . LISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQD. . . . . . . . . . . . L
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Template Sequence  VSDIVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRX
Template Known Secondary structure 

STTTT

STTSSTTSS

STT
TT

T
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   67..70.........80.........90.........100.........110.........120.........130.........140......
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Query Sequence  IVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQL
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Template Sequence  GIALVPEGRRIFPELTVYENLXXGAYNRKDKEGIKRDLE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . WIFSLFPRL
Template Known Secondary structure  T
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TTSBGGGTT


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Query Sequence  GLDPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTF. . . NGTIIFISHDRSFIRNMATRI
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Template Sequence  KERLKQLGGTLSGGEQQXLAIGRALXSRPKLLXXDEPSLGLAPILVSEVFEVIQKINQEGTTILLVEQNALGALKVAHYG
Template Known Secondary structure  TTTTSBSSSS
TT

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TTTT

TT

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   129130.........140.........150.........160.........170.........180.........190.........200........
 
   224.....230.........240.........250
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Query Sequence  VDLDRGKLVTYPGNYDQYLLEKEEALR
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Template Sequence  YVLETGQIVL. EGKASELLDNEXVRKA
Template Known Secondary structure  TT.T
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   209210........ .220.........230....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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