Return to main results Retrieve Phyre Job Id

Job DescriptionP43672
Confidence100.00%DateWed Jan 25 15:20:54 GMT 2012
Rank15Aligned Residues208
% Identity30%Templated1g2912
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.......
Predicted Secondary structure 



























.............
Query SS confidence 


































































. . . . . . . . . . . . .
Query Sequence  MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQDLI. . . . . . . . . . . . .
Query Conservation 
 

    

  

   

  


 
  

 




 











 
   

 
 
       .............
Alig confidence 


































































.............
Template Conservation 
  
 
 

         
  

  
  

   
 
 









 
 
      
 
   
  
             
Template Sequence  MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKD
Template Known Secondary structure 
TTTT

STTSSTSS

STTGGGT

GGG
Template Predicted Secondary structure 


































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   68.70.........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure  ..














Query SS confidence  . .













































































Query Sequence  . . VARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQ
Query Conservation  ..



 
        

                                                       
  

  
Alig confidence  ..






















..................................




















Template Conservation    
    
   
    

 
 
   ..................................                  
  
Template Sequence  RDIAMVFQSYALYPHMTVYDNIAFP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LKLRKVPRQEIDQRVREVAEL
Template Known Secondary structure  SS
S




TTS
..................................TT

Template Predicted Secondary structure 











..................................



Template SS confidence 















































































   81........90.........100..... ....110.........120......
 
   146... 150.........160.........170.........180.........190.........200.. .......210.........
Predicted Secondary structure 



..



















....





Query SS confidence 



. .




















































. . . .
















Query Sequence  LGLD. . PNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTF. . . . NGTIIFISHDRSFIRNM
Query Conservation 

  ..       





 

 

 

   










 

      
   
   ....  








 


 
Alig confidence 



..




















































....
















Template Conservation    
          

 
  


 

 

   
 






  


      
   
  
    
 


  

        
Template Sequence  LGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTM
Template Known Secondary structure  T
GGGTT

GGGS
T

S
TTTTS
T
S
Template Predicted Secondary structure 



























Template SS confidence 















































































   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   220.........230.........240...
Predicted Secondary structure 






Query SS confidence 























Query Sequence  ATRIVDLDRGKLVTYPGNYDQYLL
Query Conservation   
 
  
  
 
    
 
  
  
Alig confidence 













.








Template Conservation   
 
  
  
 
  . 
    
  
Template Sequence  GDRIAVMNRGVLQQ. VGSPDEVYD
Template Known Secondary structure 
STT.
Template Predicted Secondary structure 



.

Template SS confidence 























   207..210.........220 .........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions